Coregonus clupeaformis (lake whitefish): 121540903
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Entry
121540903 CDS
T08357
Name
(RefSeq) rab11 family-interacting protein 5
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121540903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121540903
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121540903
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
End3
DUF7822
DUF2203
Motif
Other DBs
NCBI-GeneID:
121540903
NCBI-ProteinID:
XP_041705977
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All DBs
Position
3:complement(15123732..15148904)
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AA seq
639 aa
AA seq
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MMSLIDLNDDQRWVPTHVNVTVLRARGLRTKDKHGSRYVYTIIQVGKEKYTTGLVEKATV
PEWNEECCFELLPGILEAGGRSAFPSGSGDLVINVMHRVLIGLDVFLGQAIVPLDKIFQD
GMCPRDEWLKLNSKAGRKEKERGEMQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKMGDMESSSAIVPGRFAALSGSLGQTFREGGGGGEDPMEVDEEKRRKVKDFFLGKGK
LRRSSDTRSCSSLASESSVSSLTSESPPPLGQGLLAAPPSSLSPPLYSNKVKVDTHHRDT
DLAKKVFTTTQSSPLILTHKQAFSDEASGITTTAVPQPCPAVESLKGQGMTLSQSSLCIN
GSHVYGSEPKGSGTLPSKLVLLEKCFPLSHSLQNLTKRSEDNGSAGDGRRWSFDKVKKEE
KYEKKAEPHVSQVQSARVGGCPVQAAAPMLSSTTTVDSADKGKKLRKSLFSRGRSDSLPA
KSAPSQGCPLPEGRLRGLFGSSDSQNKPSPHPVKPLTTAASQGEKKEGRSILEKLKSSIH
PGRAAQQTLAETEESLADSSAQYEQLTKMELISLLLQQEMDVEKQQAASDQRAALLEKHE
AELKKIKAQVRDLEDYIDKLLVQIMEQTPTLLQVRSRHK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacttatagacttaaacgatgaccagagatgggtgcctacacatgtgaatgta
actgtccttcgtgcaaggggtttgcggacgaaggacaagcacgggagccgttatgtttac
accatcattcaggtggggaaggagaaatacaccaccggtttggtcgagaaggcgactgtg
cctgagtggaatgaggaatgctgtttcgaacttctccccggaatactggaggctgggggt
cgcagtgcttttccctcagggagcggtgacttggtcatcaacgttatgcaccgtgtgctt
atcggacttgacgtgtttcttggtcaagcaatcgtccctttggataaaatatttcaagat
ggaatgtgccctagagatgaatggctcaaactcaactccaaggccggccggaaggagaag
gagcgcggcgagatgcaggtgacggtccagttcacccgcaacaacatgacagccagcatg
tttgacctaaccatgaaggacaagccacggtccgcctttggcaagctcaaggaccgtgtg
acggggaggaagatgggcgacatggagtcatcatcagccatcgtgccgggacgcttcgcc
gcactgtcgggttccctagggcaaacattcagagaggggggcggaggaggagaggacccc
atggaggtagacgaggagaagcggagaaaggtgaaggatttcttcctggggaagggaaaa
ctgcggaggtcgtccgacacaaggtcgtgctcgtcgctggcctcggagagcagcgtgtca
tccttgaccagtgagagcccccctcctctgggccaaggcctcctggcagccccacccagc
tccctcagcccccccttatacagcaacaaggtcaaagtagacacccaccacagagataca
gacctagctaaaaaagtgttcaccaccacacagtcttcccctttaatactgacccacaag
caagccttcagcgacgaggcgagtgggattaccactactgccgttccccagccctgtcct
gctgtggaatccctcaagggtcagggtatgactctctcccaatcctctctgtgcatcaac
ggaagccacgtctacggatccgaacccaagggctcaggcaccctcccatccaagctggtc
ctcctcgagaagtgcttcccactctctcattcgctgcagaacctcacaaagcggagcgag
gacaatggttccgccggcgatgggcggcgctggtccttcgacaaggtgaagaaggaagag
aagtacgagaagaaggccgaaccacatgtctcccaggttcaaagcgctcgggttgggggt
tgtccggtgcaggcagccgccccgatgctgtcttccactaccacggtggactcggcagac
aaagggaaaaagctcagaaagtcgttattctccagagggaggagtgattctctacctgcc
aagtcggcgccgagccagggttgtcctctccccgaggggagactgcgaggcttgtttggc
tccagtgactcccagaacaagccaagcccccacccagtgaagcccttgaccaccgcagcc
agtcagggggagaagaaagagggccggtcaattctggagaagctcaagtcttccatccac
ccaggccgcgccgcccagcagacactggctgagactgaggaatcgttagcggacagctcg
gcccagtacgagcagctgaccaaaatggagctgatctcccttctgctgcagcaggagatg
gatgtggagaagcagcaggcggcctccgaccagcgggcggcactgctggagaaacacgag
gcggagctgaagaagatcaaggcgcaggtgcgcgacctggaggactacatcgacaagctg
ctggtgcagatcatggagcagacacccacactcctccaagtgcgctcccgacacaagtga
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