Coregonus clupeaformis (lake whitefish): 121541135
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Entry
121541135 CDS
T08357
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121541135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121541135
Transporters [BR:
cclu02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
121541135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
Pentapeptide_4
MFS_2
Pentapeptide_3
Pentapeptide
DUF6077
Motif
Other DBs
NCBI-GeneID:
121541135
NCBI-ProteinID:
XP_041706048
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All DBs
Position
27:complement(16739906..16824375)
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AA seq
740 aa
AA seq
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MDESYNNRTSLVKGAKDIAKEAKRHAAKKFSKVVNRASDEYSSQHNYSQFQNEDEDDDDG
RSAYTQPDGNDHFPGGRTANDEDGEDYASDATEGHDDEDEIYEGEYQGVPADGKPRDGHD
SLGQLVSDSLRDRKDLEQERQADEEELAQQYELIMQECGHGRFQWQLFFVLGMALMSDGV
EVFVVGFVLPSAEMDMCVPNSGAGWLGSIVYLGMMVGAFFWGGLSDKVGRKQCLLIAMSV
NGFFSFLSSFVQGYGMFLFCRMLSGFGIGGAVPIVFPYFAEFLAREKRGEHLSWLCMFWM
IGGIYASAMAWLIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFIPESPRFF
LEMGKHDEAWMVLKQIHDTNMRARGEPEKVFTVNRIKLPKHLDELVEMQSDSTNPVAKVL
FRIRTELRGIWLTFMRCFNYPVRDNTIKLAIVWFTLSFGYYGLSVWFPDVIHHLQSDEYA
SRVKTHNNERIEDFTFNFTLENQIHTNGVFINDRFISMKLRSVTFIDSTFQNCYFDDVST
VGSIFKNCTFVEAFFYNTDIDDSKLVGSRVINSSFHHNKTGCQMTFDDDYSAYWVYFVNF
LGTLAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLS
ISAWNSLDVVTAELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKAIPILLASAV
LVGGGLVGLRLPDTRGNVLM
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcgtacaacaacaggacgtcactggtgaagggcgccaaggacatcgccaag
gaggccaaacgccacgccgctaagaagttcagcaaggtcgtcaaccgcgcttcggacgag
tactcctcccaacacaactacagccagttccagaacgaggatgaagacgatgatgacgga
cgctccgcctacacgcagcccgacggcaatgaccacttccccggtggtcgcaccgccaac
gatgaagacggggaagactacgccagtgatgccacggagggtcacgatgatgaagatgag
atctatgagggggagtatcagggggtgcctgctgacgggaagcctagggatgggcatgat
tctctgggtcaacttgtctcagacagcctgagggaccgtaaggacctggagcaggagagg
caggcggacgaggaggagctggcccagcagtatgagctgatcatgcaggagtgtggccac
ggcaggttccagtggcagctgttctttgtgctgggcatggcgctgatgtctgatggggtg
gaggtgttcgtggtggggttcgtcctgcccagcgctgagatggacatgtgtgtccccaac
tctggagcagggtggctaggcagcatagtgtacctggggatgatggtgggggcattcttc
tgggggggtctgtcggacaaggtgggccgtaaacagtgtctgcttatcgctatgtctgtc
aacggcttcttctccttcctctcctccttcgtccaggggtacggcatgtttctcttctgc
cgcatgctctccggcttcgggattggtggggcggtgcccatcgtgttcccttactttgct
gagttcctggcaagggagaagagaggagagcacctgagctggctctgcatgttctggatg
ataggagggatctacgcctcggccatggcctggctcatcataccacactacggttggagt
ttcagtatgggctcggcttaccagttccacagttggagagtgtttgtggtggtgtgtgct
ctgccctgtgtgtgtgctgtcgtagcactcaccttcatacccgagagcccacggtttttc
ctagagatgggtaaacatgacgaggcctggatggtgctgaaacagatccatgacacaaac
atgagggcccgtggagaaccagagaaagtcttcactgtgaacaggataaagcttcccaag
catctggatgagttggtagagatgcagtcagactcaaccaaccctgtggccaaagtcctc
ttcaggatcaggaccgaactcagagggatctggttaacgttcatgagatgtttcaactac
ccagtcagagacaacaccatcaaactggccattgtgtggttcacactgtcttttgggtac
tacggcctatcagtttggttccctgatgtcatccatcaccttcagtctgatgagtacgcc
tccagagtgaagactcacaacaacgaacgcatagaagacttcacctttaacttcacactg
gagaaccagatacacaccaacggagtgttcatcaacgacaggttcatcagcatgaagttg
aggtccgtcaccttcatagactctacgtttcagaactgttactttgatgatgtgtcaaca
gtaggctcaatattcaagaactgcaccttcgtagaagccttcttttataacacagatatt
gacgattctaagctggtggggtcgagggtgatcaacagttcattccatcacaacaaaacg
ggctgtcagatgacctttgacgacgactacagcgcctactgggtctactttgtcaatttc
ctggggacgctcgccgtgttgcccggcaacatagtctccgccctcctcatggacaagata
gggcgcctgagcatgctggggggctccatggtgctgtcaggcatcagttgtttcttcctg
tggtttggtaccagtgagtctatgatgatcttcatgctgtgtctctataacggcctcagt
atatcggcctggaactccctggatgtagtcactgctgagctctaccctacagacaggagg
ggtacaggctttggcttctgtaatgccatgtgtaagctggcagcggtgctggggaacctg
atcttcggctctctggttggcattactaaggccatccccatcctgctggcgtcggctgta
ctggtgggaggaggactggtggggctacggctgcctgacacacgcggcaatgtcctcatg
tag
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