Coregonus clupeaformis (lake whitefish): 121541153
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Entry
121541153 CDS
T08357
Name
(RefSeq) nodal homolog 2-A
KO
K04666
nodal
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121541153
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121541153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121541153
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121541153
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
121541153
NCBI-ProteinID:
XP_041706066
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Position
27:complement(22941216..22943989)
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AA seq
417 aa
AA seq
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MEGLALAFLFALLVDLISVVGAENFPGNREAFFHGIRGFPRPSRGHRHPVHHSNRFPLYM
MQLYRTLLEGDTARAPTVSTARTNSDDNPRLHDSDSVLSLVAKSCHQSGGRWSVTFDMSS
ISASDNVQRSELRIRLPAFSASERVTVDMYHSQRCSYSSPPCPKESLFLGYLKAEPSSLT
STSNWRVFNVTALLHYYWLHQKGSATGQEERRPVEREEEEGQERVLHPTADRVMVVVFSK
HQAEKRAPTLIHTAEHSKYVTLDWEQAVAGADPAVSVEVEGGKGASRRKRHGHHQRAGVA
GVAPGVAPMEERKDPLCRKVDMWVDFDQIGWKEWIVYPKRYNAYRCEGSCPTPVDETFTP
TNHAYMQSLLKLHHPDRVPCPSCVPTRLAPLSMLYYENSEVVTRHFEGMVVEECGCH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaggactcgctctggctttcttatttgcgcttctggtggacttgatcagtgtggtt
ggagcggagaatttccccgggaaccgtgaggctttcttccacggcattcgtgggtttccc
cggccaagcagaggtcacaggcaccctgttcatcactcgaacaggttcccactctacatg
atgcagctctaccggactctactcgagggagacaccgccagggcgccaactgtcagcacc
gcccggaccaacagcgatgacaacccccgccttcacgactctgactcggtactcagtctg
gttgccaaaagttgtcaccagagcggtgggaggtggtctgtcacctttgacatgtcctcc
atctctgcaagtgacaatgtccagcgctccgagctgcggatccgcctgcctgccttctct
gcctctgagcgtgtcactgtggacatgtaccactcccagagatgctcctactccagcccg
ccatgcccaaaggagagcctcttcctgggctacctgaaggcagagccaagctccctgacc
tccacatccaactggagggtgtttaacgtcaccgccctgctccactactactggctgcac
cagaaaggctccgcaactggccaggaagagagaaggccagtggagagagaggaggaggag
ggtcaggagagggtcctgcaccccacagccgaccgggtcatggtggtggtcttctccaag
caccaggcggagaagcgggctcccaccctcatccacaccgctgagcactccaagtacgtc
actctggactgggagcaagctgtagctggggccgatcctgctgtcagcgtagaggtagag
ggcggaaagggagccagtcgcaggaagaggcacgggcaccaccaaagagcaggagtggct
ggggtggcccctggcgtggcccccatggaggagaggaaggacccattgtgcaggaaggtg
gacatgtgggtggactttgaccagattggctggaaggagtggattgtttaccccaagcgc
tacaacgcctaccgctgtgaaggcagctgccctaccccagtagacgagaccttcaccccc
accaaccatgcttacatgcagagtctgctgaaacttcaccacccagacagggtcccatgc
ccgtcctgtgtgcccacccgcctggcccctctgtccatgctgtattacgagaacagcgag
gtggtgacgcggcactttgagggcatggtggtggaggagtgtggctgccactga
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