Coregonus clupeaformis (lake whitefish): 121541236
Help
Entry
121541236 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121541236
04137 Mitophagy - animal
121541236
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121541236
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121541236
04121 Ubiquitin system [BR:
cclu04121
]
121541236
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121541236
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121541236
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
Others
121541236
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121541236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
121541236
NCBI-ProteinID:
XP_041706148
LinkDB
All DBs
Position
27:complement(37769001..37771335)
Genome browser
AA seq
657 aa
AA seq
DB search
MDSKAKELLSWSASSVVPGGGITAARLFHIMRDQTVTVIIMDNRSGRDFEESHIHVPTQI
CISIPEEAINPGITVNQIEARLPEASREQWKRRGFVDYIILLDWFSCVTDLRLGTPLKSL
KDALYKWDSTTDLHREPLVLEGGYENWLLFYHMYTTNAKVRPPRQHALNTLPQLNFCYPS
LEELKPSAPPLPAQKPERELQVSPAGQQREPQTKPRNEDTICSVAGLPDGWMKFLNTVTG
TYRYYHAPTNKVHLYLPGASIPQAPSPPPPLCPNTAFPRPPAQPAPAKITKPSPEVYAKM
EIAKLSAAKIRNLDPVDGGMGAMLTGLCDSRTCYMNCILQCLCNIPAMAEYFTNNYYQED
INRTNILGHKGEVVEEFGVIMKAMWSGLYKCISPRDFKFTMGKVNEQFAGNEPRDARELM
LCLLDGLHEDLNKGDTSKLYQWEVNDHHLDDQRAADLAWSRHKLRNESIIVALFHGQLKI
TVQCLTCQHKTRTFETFDHRNLPLASSNKCSLHDCLKLSSREEKLDNHNKVFCSHCKALR
DSMSKWEIWKVPPILVVYLLRLTCDGRGMRKLQSNVDFPLENLDLTQYVIGPKQRLKKYN
LFAVSNHYGGLDYGYYTAFCKNTIKHQWYQFQDKDVSDISTSSVKSSAACILFYSSL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaaagctaaggagcttctctcttggtctgcaagctctgtggtgcctggagga
ggaatcacagctgccaggctgttccacatcatgagggaccagacagtgactgtcatcatt
atggacaaccgtagcggcagggactttgaggagtcccatatccatgtccccacacagatc
tgcatcagcatccctgaggaggctatcaacccagggatcactgtgaaccagatcgaggcc
aggctgccggaagcttccagagaacagtggaagagacgggggttcgtagactacatcata
ttactggactggttcagctgtgtcactgacctcagactggggaccccactcaagagcctc
aaagacgctctctacaagtgggacagcaccacagatctccacagagaacccctggttctg
gagggaggctatgagaactggttgctcttctaccacatgtacacgaccaacgccaaagtc
agacccccccgacaacacgccctcaacaccctccctcagctgaacttctgctacccctct
ttggaggagctgaagccttcagccccccctctacccgcccaaaagcctgagcgtgaactg
caggtttcgccggccggccagcagcgggagccgcagaccaaaccgaggaatgaggacacc
atttgtagtgtagcaggcctgcctgatggctggatgaagttcctgaacacggtgacaggt
acctaccgctactaccacgcgccaaccaacaaagttcacctctatctccctggggcaagc
attccccaggccccctctccacccccccctctatgtccaaatacagcattccccaggcca
cctgcccaacctgcccctgccaagatcactaagcccagtcctgaagtgtatgccaagatg
gagatcgccaagctgtcggcagctaagatccgtaacctagaccctgtggatggagggatg
ggtgccatgctgacgggactgtgtgacagcaggacctgttacatgaactgcatcctgcag
tgtctatgtaacatcccagccatggctgagtacttcaccaataactactaccaggaagat
attaacaggaccaatatcctgggccataagggggaagtagtggaggagtttggggtgata
atgaaggctatgtggtctggcctgtataagtgtatcagccccagggactttaagtttacc
atgggaaaggttaacgaacagtttgctggcaacgaaccacgggatgcaagggagttaatg
ctgtgcctcctagatgggctacacgaggacctcaataagggtgacactagtaagctgtac
caatgggaagtgaatgaccaccacctggatgaccaaagggcagccgacctggcctggagc
agacacaagctgcggaatgagtccatcatcgtagctctgttccacggtcagttgaagatc
actgtccagtgtctcacctgtcaacacaagacacgcaccttcgagaccttcgatcaccgc
aacctgccactggcttcatctaacaagtgctccctacacgactgtctgaagctgtccagt
agagaggaaaagctagataaccataacaaggtgttctgcagtcactgcaaagccttaaga
gactccatgagtaaatgggagatctggaaggttccgcccatcctagtggtttacttactt
cgattgacctgcgatggcagagggatgcggaaactccagagcaacgttgacttccctctg
gagaacctggacctgacccagtatgtcattggtccaaaacagaggctcaagaaatacaac
ctgtttgcagtctctaatcactatgggggtctggattatggctactacacagccttctgt
aagaacaccatcaaacatcagtggtaccagtttcaagacaaggatgtttcagacatctcc
acctcctcagtcaagtcctctgccgcttgcatcttattctactcctctctgtga
DBGET
integrated database retrieval system
