Coregonus clupeaformis (lake whitefish): 121541239
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Entry
121541239 CDS
T08357
Name
(RefSeq) aristaless-related homeobox protein-like
KO
K09452
homeobox protein aristaless-related
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121541239
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121541239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121541239
NCBI-ProteinID:
XP_041706151
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All DBs
Position
27:complement(37881944..37887035)
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AA seq
430 aa
AA seq
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MSHPSGKDASDTTESKPKSPMLSYCIESILGRRSPLKVRLTGMQSLPMLAGRVEHNASLE
VSRKDADMHLPTKLRRLYGPGGKFMDSSRGIRELEEQEDRQRPLDKVYENLKITQAPQVS
ISRSKSYRENASQSQSEEEQNLGRGKEEQGELGAPKFEDTGKERICEDVEMSPKNGESLH
INGDVKDGEDNLCLSAGSDSDEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTRE
ELAMQLNLTEARVQVWFQNRRAKWRKREKSGGQTHPPGHPISGPLGAAHHLSHYLEGSPF
VPHSHPSLECAWTAATTSFQGLTHPFTSSSSPLGFGPFMGAAMFRHPTFINPSFGRLFSS
MGPLTLLRQPIPAVEAPVQPPTALSEPSPSSPVDRRASSIAALRLKAKEHSAQLTQLNIL
PSSTTGKEVC
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagccatccaagtgggaaagatgcctccgacacaaccgagagtaaacctaaatcgccc
atgctctcatactgcatcgaaagcatactcggccgaagaagtcctctcaaagtcagactc
acaggaatgcaaagtttacccatgctggctgggagagtggagcataatgcgtctttggaa
gtctctcgtaaagatgcggacatgcacctgcccaccaagttgcggcgtctatatggccca
gggggaaagttcatggactccagtcgcggaattcgcgagcttgaggagcaagaagacagg
cagcgtcctctagacaaagtctacgaaaatctgaaaatcactcaggcgccacaagttagc
atcagccgcagtaaatcatacagggagaacgcgtcccaaagtcagagcgaggaagaacag
aacctcgggcgagggaaagaggagcagggggaactaggcgccccaaagttcgaggacact
ggcaaggagcgcatctgcgaagacgtagaaatgtccccaaagaacggggagagtttgcac
atcaatggagatgtaaaagacggagaggacaacttgtgcctttcagctggcagtgactca
gacgaggggatgctaaagcgaaaacagaggagatacaggactacgtttacaagttatcag
cttgaggagctggagagagctttccaaaagacgcactaccctgatgtgttcacgagggag
gagttagcgatgcaattgaatctcaccgaggcgcgtgtgcaagtgtggttccagaaccgc
cgagctaagtggcggaaaagagagaaatctgggggtcagactcaccccccgggccacccc
atctctggacccctgggtgcagcacaccacctaagccactacttggagggaagtcctttc
gtgccccactctcacccctccctggagtgtgcctggacagctgctaccacctcgttccag
ggtctgacccaccccttcaccagttcttcctcccccttgggatttggccccttcatggga
gcagccatgtttagacaccccaccttcattaacccctcctttggaagactcttctccagc
atgggtcccctgacactcttacgccagcccatacctgcagtagaggccccagtccagccc
ccgacggccttgtcagagccctccccctcctcgcctgtggaccgccgggcctccagcatc
gcagcactgcggctcaaagctaaagagcattccgctcagctgacacaactcaacatccta
ccttccagcaccactgggaaggaggtgtgttga
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