Coregonus clupeaformis (lake whitefish): 121541301 Help Entry 121541301         CDS       T08357                                  Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     121541301  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:cclu01009]     121541301   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:cclu04515]     121541301 Protein phosphatases and associated proteins [BR:cclu01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      121541301 Cell adhesion molecules [BR:cclu04515]  Cadherins   Protocadherins    121541301 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 SGBP_BT4661-like Fibulin_C DUF7171 PDGLE Syndecan NnrU Motif Other DBs NCBI-GeneID:  121541301 NCBI-ProteinID:  XP_041706221 LinkDB All DBs Position 3:complement(21155311..21510048) Genome browser AA seq 1217 aa AA seqDB search MLCQSSRVMALRWDATLVLAAMLLVCCGAAPTDILYRMLEEQPPNTLIGSLASDEGLPDS GHLYKLEVGTPYLRVDGKTGDIYTTEVPIDRETLRDCRNLFEGDKCFLEFEVSITDLKQG QGPRLIEGRIEVQDVNDNTPQFTSPILMLSIPENTHIGALFSIPMASDKDSGHNGVAEYS LSAGIDADQLFSLQVAEDTDEKQPQLIVMGNLDREQKDSYDLNIRVVDGGTPPRASSALL RVTVTDQNDNAPKFERSHYEAELAENSPMGHSVLQVKANDADMGTNGEIDYSLHQASDAV QRLLRIDRSTGIIYVKGLVDREEESFLKFFVVAKDRSPNSKSSKVLVTINVKDQNDNAPA IEIRGIGLVTHHDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPAS ESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVF SPTLFEVDFAEENQPGDKVLDVVATDADSGSNAELTYSIIMDSTTKGLFEIDPKTGEVRV MNTLDREHREHYEFHVAAADKGSPSLRGTATVVVKVLDRNDNDPKFMLSGYSFSVLENMP PLSPVGMVTVIDADKGENARVRLSVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLK AVDAGDPPRSSYVGVTINVLDENDNSPYVTKPSNSSYKYLPPLTTPETRVEVVEAEDIDT GPNAELVFSITGGNPYGLFHISPNNGEITLAQEFTRKHNGLHRLVVKVSDKGKPQRHTTA LVHIFVNETMGNITLIESLVGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILV IVVVVVIRHRMQKDTKSGYQAGKKESKDLYAPKAGPKNGKGKKSKKGKAPKPAKPLEEEE EASLQKGLNFNLINDSVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASK KHQAVQDLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQD LQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLR PLPDVAMTGNCTHECTEFGHSDACWMPGQPSPNRKSSTKNTPKLSTFVPYLESEGQDHLM ANGSPKPLAEERGSGGGGSGGGGSKMANIRFLPPYSSAFSGGIDSGKGCEEIPLSQAAEY HSATTPTSQGSKREIYL NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgctgtgccagtcgagcagagtgatggcgctgaggtgggatgccacgctggtgttggcc gccatgcttctggtttgctgtggcgccgctcccactgacattctctaccggatgctcgag gagcagccgcccaacacgttgatcggcagcctggcatcggatgagggcctgcccgactcg ggccacctgtacaagctggaggtgggcaccccttacctgcgcgtggacggcaagactgga gacatctacaccacagaggtccccatcgaccgtgagacactgcgggactgccgtaacctg tttgagggcgacaagtgcttcctggagttcgaggtgtccatcacggacctgaagcagggc cagggaccgcggctgatcgagggccgcatcgaggtgcaggacgtcaacgacaacacaccc cagttcacctcacccatcctcatgctgtccatcccagagaacacgcacatcggggcactc ttctccatccccatggccagcgacaaggactcgggccacaacggcgtggccgagtactcg cttagtgccgggatcgacgccgaccagctcttcagcctgcaggtggccgaggacacagac gagaagcagccgcagctcatcgttatgggcaacctggaccgcgagcagaaagactcgtat gatctcaacatccgtgtggtggacgggggcacaccgccgcgcgccagcagcgccctgctg agggtgaccgtcaccgaccagaacgacaatgcacccaagttcgagaggagccactatgag gctgagctggccgagaacagccctatgggacattcagtcctgcaggtgaaagccaacgat gctgacatgggtaccaacggggagatcgactacagcctgcaccaggcctccgatgccgtc cagaggttgctgcgcatcgaccgctccacagggatcatctacgtcaaggggctggtggac cgtgaggaggagagcttcctcaagttctttgtggtggccaaggaccgcagccccaactcc aagagctccaaagtcctggtgaccatcaacgtcaaggaccagaatgacaatgcacccgcc atcgagatccgtggcattggcctggtcacccaccacgacggtgtggccaacatctcagag gacatgcccatcggcacgcccgtggccctggtgcaggtgtcggaccgtgatgaaggggag aacgccgtggtcacctgcgtggtggccggggacgtacccttccagctgcggcccgccagc gagtcagccaacgaccgcaagaggaaatacttcctgcagaccacgaccctgctagactac gagcgcatcaaggactacaggattgaaatagtagcagtggactcaggtaaccctgcactg tccagcaccaactccctgaaggtgcaagtcaccgacatgaatgacaatgcgccggtcttt tcccccaccctgttcgaggtggactttgcagaggagaaccagccaggtgataaggtgctg gatgtggtggccacggacgcggacagtggctccaacgcagagctgacctacagcatcatc atggactcgaccactaaggggctctttgagatcgaccccaaaacgggagaggtgcgcgtg atgaacacgctggaccgtgagcacagagagcactacgagttccatgtggcggcagccgat aagggctcgcctagcctgagggggacggccacggtggtggtcaaggtgctggaccgtaac gacaacgaccccaagttcatgttgagcggctacagcttctccgtcttggagaacatgcct ccgctcagccctgtcggcatggtgacggtcatcgacgcagataagggcgagaacgccagg gtgcggctctcggtggagcccgacaatggcaagtttgtcatccagaacggcacaggcact atcctctccagcatctcctttgatcgcgagaaggagagcacatacactttccgcctcaag gctgtggacgccggtgaccctcccaggtcctcctacgtgggtgtgaccatcaacgtcttg gacgagaacgataactccccctatgtcaccaagccctctaactcctcctacaagtacctc ccacctctcacgaccccagagacacgcgtggaagtggtggaggccgaagacattgacacg ggacccaacgccgagctggtcttcagcatcaccggcgggaacccctacggactgttccac atctcacccaacaatggggagatcaccctggcccaggagttcacccgcaagcacaacggg ctccaccgtttggtggtgaaggtgagcgacaaaggcaagccacaacgtcacaccaccgcc ctggtccacatcttcgtcaacgagaccatgggcaacatcaccctgatcgagtctctggtg ggtcacagcctctacactcctctggacagagacattgccggggaccccaactacgcgctg gcccagcgcagcaacatcctgtacggcagcctagcgggcatcgccggagtcatcctggtc attgtggtggtggtggtgatccgccatcgcatgcagaaggacaccaagagcggctaccag gcaggcaagaaggagagcaaggacctgtacgcccctaaagcagggccgaagaacggcaag ggcaaaaagagcaagaagggcaaggcgcccaagcccgccaagccactggaggaggaagaa gaggcaagcctccagaagggcctcaacttcaacctcataaacgatagtgtcaatgacagt ccccggatccacctgcccctcaactaccccccgggcagccccgacctgggcagacactac cgctccaactcccccctgccctccatccagctgcagccccagtcgccctctgcctccaag aagcaccaagccgttcaggacctgcccgccaccaacacctttgtgggcacgggtgacaac aactctacaggctccgatcaatattcggattacagctacaaggcaaacccgccaaaatac agcaacaaacagctcccccatcgccgagtgaccttctccacggccaatcaggctcaagac ctgcaggacccctcccagcacagctactatgacagcggattggaggagtcggagaccccc agctccaaatcgtcatcagggccccgcattgggcccctggccctgcctgaggaccactac gagaggaccaccccggacggcagtatcggagagatggagcacccggagaacgatctcagg cctctgcccgatgtggccatgactgggaactgcacccatgagtgtaccgagttcggccac tccgacgcctgctggatgcctggccagccctcccccaatcgtaagagctccaccaagaac acccccaagctctccaccttcgtgccttacctggagagtgaggggcaggaccacctcatg gccaacggcagccccaagcccctggcagaagagcgtgggagtggtggaggtggcagcggc ggtggaggctccaagatggctaacatccgcttcctgcccccttacagcagtgccttctcc gggggcatcgactccggcaaaggctgcgaggagatccccctgagccaggcagccgagtac cactctgccaccacacccaccagccagggatccaagagagagatttacctgtga

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