Coregonus clupeaformis (lake whitefish): 121541330
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Entry
121541330 CDS
T08357
Name
(RefSeq) bromodomain-containing protein 8-like
KO
K11321
bromodomain-containing protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121541330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121541330
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
121541330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
121541330
NCBI-ProteinID:
XP_045063878
LinkDB
All DBs
Position
27:38778818..38793943
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AA seq
841 aa
AA seq
DB search
MASGIGKHKLLSMGPTEPWSVREKLCLATSVMKSGDQNWVSVSRAIKPFAEPGRPPDWFS
QKHCASQYSELLETTETPKRKRGEKGEVVETVEDLIVRRLTAERIDELKRLIKDTQEKHR
KLKTEAELIQAGHLDSKLEDLWGEIVQKKKQEQDEADVKRKATDTAYLARQAVKNTPKRV
PSVTVRSPPGCGSPSLEFCQGDTPQNTPEDPSTSVTAPGAAGFMPLTEACGLGGAEAGLG
TLLDESPQKKLLGQKATPPPSPLLSELLKKGNLLPTSPRLVGEGDLPGNMTIAHDLQLTG
SVLPGCLATGAPTLSRLLEAGPQFSAPLGSLASSTDSSSVLLTAAAPPTMDSPASLHTGG
NEVGASQPGPGEGTEEDLVTVSYMAEELDQETVGDIIAIIEDKGDENTEALDAAAVEAAL
SLCEETGYALSGRLEPGPFKPPESDPSGAPHSSSHLSSLAGSQEVKREALELRSGSSACD
SQDNCPSGYPRPLGISGLPPSSSSSSCSSMMLEHSQAIGGRLQPGAMGGADGEGSPVSPH
ATIKCESEEWTQQGADTPHADSEDGPMTRRHSKDVKEEEGVSDGEEGSASETKEGLDGDG
GDEEGDGAEAYLSEAEGETELEPPASESEDGYSLHTASSSLQLHTTADSIPSSPASSQFS
MCSEDQEARQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVHRPMDLSSI
KKNIETGLIRNTAEFQRDIMLMFQNAVMYNSCDHDVFHMALEMQRDVLEQVQQFLATQLI
MQTSESGISAKSLRGRESTRKQDPSDKDSVPMASPAFLLSLFDGGTRGRRCAIEADLKMK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgggattggaaaacacaagttgctctccatggggccaacagagccatggtcg
gtgagggagaagctgtgcttggccacctctgtcatgaagagcggggaccagaactgggtg
tctgtcagtcgagccatcaaaccatttgcagagccaggacgaccccctgattggttctca
caaaagcactgtgcctcccagtactcagagctcctggagacaacagagaccccaaaacgg
aagcgtggtgagaaaggtgaggtggtggagacagtggaggatttgatagtccgcaggctc
acggcagagaggattgatgagctgaagagactgatcaaagacacacaggagaagcacagg
aagctgaagacagaggcagagctgatccaagccgggcacctggactccaagctagaggat
ctatggggagagattgtgcagaagaagaaacaggaacaggacgaggcagacgtgaaaagg
aaggccacagacacagcctatctagccagacaggcggtgaagaacacccctaaaagagtg
cccagtgtgaccgtgcgctctcccccggggtgcggctcgccaagcctcgagttctgccaa
ggggacacaccccagaacacacccgaggaccccagcacctcagtgactgcaccaggagca
gcagggttcatgcccctgactgaggcctgtgggctgggtggtgcagaggcgggcctgggc
actcttctggatgagtccccacaaaagaagctcttgggccagaaagccacgccgccacca
tcccctctcctctctgagctactgaagaaaggcaatctcctacccacaagccccagactg
gttggagaaggtgacctgcctggtaatatgacaatagcacatgacctacagctcacaggc
tctgttctacctggctgtctggcaacaggtgcccctacactttctcgtttgctggaggct
gggcctcagttctcagctccgctgggctccttggccagcagcacagactcctccagtgtc
cttctcactgctgctgcaccccccactatggactcccccgcctcactacacacaggaggg
aatgaggtgggggcctcccagcctggcccaggggaggggacagaagaagacctagtgacg
gtgtcctacatggcagaagaattggaccaggagacagtgggggacatcatcgccatcatc
gaggacaagggtgatgagaatactgaggctttggatgcggctgcagtggaggctgctctg
tccctgtgtgaggagacaggatacgccctgtctggccgtttggagccagggcccttcaag
ccccctgagtctgacccttctggggccccacactcctcctcacacctctcctccctcgct
ggcagtcaggaggtgaagagggaggccctggagttacggagtgggagctctgcatgtgac
agccaggacaactgtccctcggggtacccacggcccctgggcatcagcggccttcctccc
tcctcttcttcatcatcctgctcttctatgatgctggagcacagccaggctattgggggt
cgtctgcagcctggggccatgggcggggccgatggggagggaagcccagtctctccccac
gcgaccatcaaatgtgagagtgaagagtggacgcagcaaggagctgacaccccacatgca
gactccgaggatggccccatgacaagaagacactccaaggatgtgaaggaggaagagggg
gtgagcgacggagaggaggggagtgcctcagagactaaagagggcctggatggggatggg
ggggatgaggagggggacggggcagaggcctacctgtcggaggcagagggggagacagag
ctggaacccccagccagtgagagtgaggacggttacagtctgcacacagcctcctcctct
ctgcagcttcacaccactgcagactctatccccagcagccctgcctcctcccagttttca
atgtgcagtgaggatcaggaggccagacaggctcagaagatctggaagaaagccatcatg
ctggtatggcgtgcagctgccaatcataggtatgctaatgtattcctgcagcctgtgact
gatgacattgccccggggtaccacagtattgttcacaggcccatggacctgtcctccatt
aagaagaacattgagacaggtctgatccgcaacacggcagaattccagcgggacatcatg
ctgatgttccagaacgcagtgatgtacaacagctgtgaccacgacgtgttccacatggcc
ctggagatgcagagggacgtcctggaacaggtccagcagttcctggccacacagctcatc
atgcagacctcagagtcgggcatcagcgccaagagcctgaggggccgggagagcacccgc
aagcaggacccctcggacaaggacagtgtccccatggcctctcctgccttccttctctct
ctctttgatgggggcaccagggggcgccgttgtgccatagaagccgacctgaagatgaag
aaataa
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