Coregonus clupeaformis (lake whitefish): 121541344
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Entry
121541344 CDS
T08357
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04382
Cornified envelope formation
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121541344
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121541344
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121541344
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121541344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121541344
04147 Exosome [BR:
cclu04147
]
121541344
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121541344
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121541344
Exosomal proteins of colorectal cancer cells
121541344
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
7tm_6
DUF1129
Motif
Other DBs
NCBI-GeneID:
121541344
NCBI-ProteinID:
XP_045064113
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Position
27:complement(36489721..36495230)
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AA seq
373 aa
AA seq
DB search
MVSAGLQMLGTALAIVGWLGSIIICVLPMWKVTAFIGANIVTAQVIWEGLWMNCVTQSTG
QMQCKVYDSLLALPQDLQAARALIIIAIIAGVFAILLGIAGGKCTNFVDNERSKPKVAIA
SGIVFLIAALLVLVPVCWSANTIIRDFYNPLLVEAQRRELGTMVSAGLQMLGTALAIVGW
LGSIIICALPMWKVTAFIGANIVTAQVIWEGLWMNCVTQSTGQMQCKVYDSLLALPQDLQ
AARALIIIAIIAGVFAILLGIAGGKCTNFVDNETSKAKVAIASGIVFLIAALLVLVPVCW
SANTIIRDFYNPLLVEAQRRELGASLYIGWGSAGLMILGGALLCSSCPPSDENHDVKYSK
AASSVAGSSKAYV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggctgggctacagatgctgggcacggccctggcgatcgtcggctggctggga
agcatcatcatctgtgttctgcccatgtggaaggtgacagccttcattggagccaacatc
gtcaccgctcaggtcatctgggaagggttatggatgaactgtgtgacgcagagcacggga
cagatgcagtgtaaggtctacgactccctcctggccttgccccaggacctgcaggctgcc
agggctctgatcataatcgccataatcgctggcgtgttcgccatcctgctgggcatcgct
ggcgggaagtgcaccaacttcgtggataacgagaggtccaagcccaaggttgccatcgct
agcggaattgtcttcctcattgctgcccttctggtcctggtccctgtctgctggtcggcc
aacaccatcatccgagacttctacaacccccttttggtcgaggcccagaggagggagctg
ggaacgatggtgtcggctgggctacagatgctgggcacggccctggcgatcgtcggctgg
ctgggaagcatcatcatctgtgctctgcccatgtggaaggtgacagccttcattggagcc
aacatcgtcaccgctcaggtcatctgggaagggttatggatgaactgtgtgacccagagc
acgggacagatgcagtgtaaggtctacgactccctcctggccttgccccaggacctgcag
gccgccagggctctgatcataatcgccataatcgctggcgtgttcgccatcctgctgggc
atcgctggcgggaagtgcaccaacttcgtggataacgagacctccaaggccaaggttgcc
atcgctagcggaatcgtcttcctcattgctgcccttctggtcctggtccctgtctgctgg
tcggccaacaccatcatccgagacttctacaacccccttttggtcgaggcccagaggagg
gagctgggagcctcactctacatcggctggggctccgcagggctgatgatcctgggcggg
gcgctcctctgcagctcctgcccccccagcgatgagaaccacgatgtcaagtactccaag
gctgctagctccgtggctggcagcagcaaggcctacgtctag
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