Coregonus clupeaformis (lake whitefish): 121541415
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Entry
121541415 CDS
T08357
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121541415
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
121541415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
HEAT_EZ
APC1_C
ARM_ECM29
Lentiviral_Tat
Motif
Other DBs
NCBI-GeneID:
121541415
NCBI-ProteinID:
XP_041706337
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Position
27:complement(4486443..4553262)
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AA seq
804 aa
AA seq
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MAAKAGDNPDSLMALTTAFCLRNLRRTMCYLGERNNLCLRSDVFLPSEICDKLVNTYMEL
VHTDSNFEPQDGFFQLFSDPHSTRLTRVQLREDFVRDRDLEAIGKQDLIELHLTYCNNLS
AHTLRTLTRFRQTLVSLSLFGCSRIFYRKGGAPLACDEEERPASRQAPDTDFSFQGFNRL
RLLNLGGLPEEVDAEALLKPLPALTSLDLSGVPLPKAAFLAQWKGRLASLVLYNVDLSEE
LINTVVELGHLRHLDISRERSSKFKMTRKILTAIVQGLVNLVSLDISGHIMLDNCTVPHF
EEAMGRPSIEPCKSSIYPFQELKRPLQFLGLYNTTLCNVTHIPAYKVTGSKNEDQVLNAI
EAYTEFRPELAHRAINQLFDIARIQHCSELLRALQLVIAALKCHKYDKSIQVTGSAALFY
LTNTEYRSDQSVRLRRQVIQVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELEFQYGRVNL
LLLKILEPARQDESIQRIAVHLCNALVCQVDNHHKEAVGKMGFVKTMLNLIQKKLQDRMC
DQVMEFSWSALWNITDETPDNCQMFLNCKGMSLFLDCLKEFPDKQELHRNMLGLLGNVAE
VRALRPQLLTPQFISVFSNLLDSKADGIEVSYNACGVLSHIMFDGPEAWAMEEPLRDTVM
DKMMDAIQSWDVTSRRNINYRSFEPILRLLPQSIATVSQHWATWALFNLVSVYPSKYCPL
LIKEGGIVLLEKVLELQTSREETKDMARKVMEQCENFKEDPMETTSTCIQQALDEGLSQD
RHLQSSLKKAIVLNCVFFFFLLLL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaagcaggggacaaccctgacagcctcatggcactgaccacagccttctgc
ctgaggaacctgaggaggaccatgtgctacctgggagagaggaacaacctttgcctgcgc
tcagacgtcttcctgcccagcgaaatctgtgacaaactggtcaacacatacatggagctg
gtccatacggacagtaactttgagccgcaggacggcttcttccagctgttctcggacccg
cacagcaccaggctcacccgggtgcagctgagggaggactttgtgcgtgacagggacctg
gaggccattgggaaacaggacttgatagagctccacctcacctactgcaacaacctatca
gcgcacaccctcaggactttaaccagattccgccagaccctggtctccctcagcctgttc
ggctgcagccgcatcttctatcgcaagggtggcgccccactggcatgcgacgaggaagag
cggccagcctccagacaggcaccggacacagacttcagcttccagggcttcaaccggctg
cggctgctcaacctcgggggtctgcccgaggaggtggacgccgaggctctgctcaagccc
ctgccggccctcacctccctagacctgtccggggtgccgctgcccaaggctgccttcctg
gcccagtggaaggggaggctggcctcgctagtgctctacaacgtggacctctcagaggag
ctcatcaacacggtggtggagctgggacacctcaggcacctggatatctcccgagagcgc
agctctaagttcaagatgacccgtaagatcctgaccgccattgtgcagggcctagtcaac
ctggtgtcgctggacatctcgggtcacatcatgctggacaactgcacagtcccacacttc
gaggaggccatgggacgtccaagtatcgagccctgcaagagcagcatctaccctttccag
gagctaaagaggcctctgcagtttctggggctctacaacaccaccctttgtaatgtgacg
catattcctgcgtacaaggtcacaggctctaagaatgaagaccaggtcctgaatgccata
gaggcctacacagagttccgcccggagctggcccaccgagccattaaccagctgtttgat
atcgccaggatacagcactgcagcgagctactgcgggcactgcagctggtgatcgctgcg
ctgaagtgccacaagtacgacaagagcattcaggtgacgggcagcgcggccctcttctac
ctgaccaacacagagtaccgcagcgaccagagtgtgcggctgcgccggcaggtcatccag
gtggtgctcaacggcatggagcagtaccaggaggtcacggtccagaggaactgctgcctg
acgctgtgtaacttcagcatccccgaggagctggagttccaatacggccgggtcaacctg
ctgctgctgaagatcctggagccggcccggcaggacgagtccatccagcgcatcgccgtg
cacctctgcaacgccctggtctgccaggtggacaaccaccacaaggaagctgttggcaag
atgggcttcgtcaagacaatgttgaatctgatccagaaaaagctacaggacaggatgtgt
gaccaggtgatggagttctcctggagtgccctgtggaacatcactgacgagacgccagac
aactgtcagatgttccttaactgcaagggcatgagcctcttcctggactgcctgaaggag
tttccagacaaacaggagctccaccgtaacatgctggggctgctgggtaatgtggcagaa
gtgagggctctgcgaccacaactcctcaccccacagttcatctctgtcttcagtaacctg
ctggacagcaaggcggatgggatcgaggtgtcctataacgcgtgcggggtgctgtcccac
atcatgtttgatgggccagaggcgtgggccatggaagagccactgagggacacggtcatg
gacaagatgatggacgctatccagagctgggacgtcacctcccgccggaatatcaactac
agatcctttgaacccatcttgcgcctgctgccccagagtatcgccacagtcagtcagcac
tgggccacgtgggcgctcttcaaccttgtgtcggtctacccgagtaagtactgccctctg
ctgataaaagaaggagggattgttctcctggagaaggtgctggagctccagacatcacgt
gaagagaccaaggacatggcgcggaaggtgatggagcagtgtgagaacttcaaagaagac
cccatggaaacgacgagtacatgcattcaacaagctttggacgaaggactttcacaggac
cgccatctccaaagttcactcaaaaaggcaatagttctgaactgtgtttttttttttttt
ttattattattataa
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