KEGG   Coregonus clupeaformis (lake whitefish): 121541415
Entry
121541415         CDS       T08357                                 
Name
(RefSeq) protein zer-1 homolog
  KO
K10350  Zyg-11 protein
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121541415
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     121541415
SSDB
Motif
Pfam: ZER1-like_2nd LRR_Zer-1 HEAT_EZ APC1_C ARM_ECM29 Lentiviral_Tat
Other DBs
NCBI-GeneID: 121541415
NCBI-ProteinID: XP_041706337
LinkDB
Position
27:complement(4486443..4553262)
AA seq 804 aa
MAAKAGDNPDSLMALTTAFCLRNLRRTMCYLGERNNLCLRSDVFLPSEICDKLVNTYMEL
VHTDSNFEPQDGFFQLFSDPHSTRLTRVQLREDFVRDRDLEAIGKQDLIELHLTYCNNLS
AHTLRTLTRFRQTLVSLSLFGCSRIFYRKGGAPLACDEEERPASRQAPDTDFSFQGFNRL
RLLNLGGLPEEVDAEALLKPLPALTSLDLSGVPLPKAAFLAQWKGRLASLVLYNVDLSEE
LINTVVELGHLRHLDISRERSSKFKMTRKILTAIVQGLVNLVSLDISGHIMLDNCTVPHF
EEAMGRPSIEPCKSSIYPFQELKRPLQFLGLYNTTLCNVTHIPAYKVTGSKNEDQVLNAI
EAYTEFRPELAHRAINQLFDIARIQHCSELLRALQLVIAALKCHKYDKSIQVTGSAALFY
LTNTEYRSDQSVRLRRQVIQVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELEFQYGRVNL
LLLKILEPARQDESIQRIAVHLCNALVCQVDNHHKEAVGKMGFVKTMLNLIQKKLQDRMC
DQVMEFSWSALWNITDETPDNCQMFLNCKGMSLFLDCLKEFPDKQELHRNMLGLLGNVAE
VRALRPQLLTPQFISVFSNLLDSKADGIEVSYNACGVLSHIMFDGPEAWAMEEPLRDTVM
DKMMDAIQSWDVTSRRNINYRSFEPILRLLPQSIATVSQHWATWALFNLVSVYPSKYCPL
LIKEGGIVLLEKVLELQTSREETKDMARKVMEQCENFKEDPMETTSTCIQQALDEGLSQD
RHLQSSLKKAIVLNCVFFFFLLLL
NT seq 2415 nt   +upstreamnt  +downstreamnt
atggcggccaaagcaggggacaaccctgacagcctcatggcactgaccacagccttctgc
ctgaggaacctgaggaggaccatgtgctacctgggagagaggaacaacctttgcctgcgc
tcagacgtcttcctgcccagcgaaatctgtgacaaactggtcaacacatacatggagctg
gtccatacggacagtaactttgagccgcaggacggcttcttccagctgttctcggacccg
cacagcaccaggctcacccgggtgcagctgagggaggactttgtgcgtgacagggacctg
gaggccattgggaaacaggacttgatagagctccacctcacctactgcaacaacctatca
gcgcacaccctcaggactttaaccagattccgccagaccctggtctccctcagcctgttc
ggctgcagccgcatcttctatcgcaagggtggcgccccactggcatgcgacgaggaagag
cggccagcctccagacaggcaccggacacagacttcagcttccagggcttcaaccggctg
cggctgctcaacctcgggggtctgcccgaggaggtggacgccgaggctctgctcaagccc
ctgccggccctcacctccctagacctgtccggggtgccgctgcccaaggctgccttcctg
gcccagtggaaggggaggctggcctcgctagtgctctacaacgtggacctctcagaggag
ctcatcaacacggtggtggagctgggacacctcaggcacctggatatctcccgagagcgc
agctctaagttcaagatgacccgtaagatcctgaccgccattgtgcagggcctagtcaac
ctggtgtcgctggacatctcgggtcacatcatgctggacaactgcacagtcccacacttc
gaggaggccatgggacgtccaagtatcgagccctgcaagagcagcatctaccctttccag
gagctaaagaggcctctgcagtttctggggctctacaacaccaccctttgtaatgtgacg
catattcctgcgtacaaggtcacaggctctaagaatgaagaccaggtcctgaatgccata
gaggcctacacagagttccgcccggagctggcccaccgagccattaaccagctgtttgat
atcgccaggatacagcactgcagcgagctactgcgggcactgcagctggtgatcgctgcg
ctgaagtgccacaagtacgacaagagcattcaggtgacgggcagcgcggccctcttctac
ctgaccaacacagagtaccgcagcgaccagagtgtgcggctgcgccggcaggtcatccag
gtggtgctcaacggcatggagcagtaccaggaggtcacggtccagaggaactgctgcctg
acgctgtgtaacttcagcatccccgaggagctggagttccaatacggccgggtcaacctg
ctgctgctgaagatcctggagccggcccggcaggacgagtccatccagcgcatcgccgtg
cacctctgcaacgccctggtctgccaggtggacaaccaccacaaggaagctgttggcaag
atgggcttcgtcaagacaatgttgaatctgatccagaaaaagctacaggacaggatgtgt
gaccaggtgatggagttctcctggagtgccctgtggaacatcactgacgagacgccagac
aactgtcagatgttccttaactgcaagggcatgagcctcttcctggactgcctgaaggag
tttccagacaaacaggagctccaccgtaacatgctggggctgctgggtaatgtggcagaa
gtgagggctctgcgaccacaactcctcaccccacagttcatctctgtcttcagtaacctg
ctggacagcaaggcggatgggatcgaggtgtcctataacgcgtgcggggtgctgtcccac
atcatgtttgatgggccagaggcgtgggccatggaagagccactgagggacacggtcatg
gacaagatgatggacgctatccagagctgggacgtcacctcccgccggaatatcaactac
agatcctttgaacccatcttgcgcctgctgccccagagtatcgccacagtcagtcagcac
tgggccacgtgggcgctcttcaaccttgtgtcggtctacccgagtaagtactgccctctg
ctgataaaagaaggagggattgttctcctggagaaggtgctggagctccagacatcacgt
gaagagaccaaggacatggcgcggaaggtgatggagcagtgtgagaacttcaaagaagac
cccatggaaacgacgagtacatgcattcaacaagctttggacgaaggactttcacaggac
cgccatctccaaagttcactcaaaaaggcaatagttctgaactgtgtttttttttttttt
ttattattattataa

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