Coregonus clupeaformis (lake whitefish): 121541421
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Entry
121541421 CDS
T08357
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase D-like
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04217
Necroptosis
cclu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121541421
04218 Cellular senescence
121541421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121541421
Enzymes [BR:
cclu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121541421
Chaperones and folding catalysts [BR:
cclu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121541421
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_1
TPR_2
TPR_11
TPR_16
TPR_19
TPR_9
ANAPC3
TPR_8
MIT
DUF3856
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
121541421
NCBI-ProteinID:
XP_041706351
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All DBs
Position
3:complement(20216804..20222856)
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AA seq
371 aa
AA seq
DB search
MSNATTVTKPSNKENPRVFFDIDIGGERVGRMVFELFADVVPKTAENFRALCTGEKGTGK
TTGKPLHFKGCPFHRIIKQFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSM
ANSGPATNGSQFFITTVPTAHLDGKHVVFGQVLKGMGLVKTLEAIETNEDTPVKLCVIAE
CGEHKDGEDWAIALNDGSGDTHPDYPEDSNVDLKDVDKVLSVAEDIKNIGNNFFKNQDWQ
SAIKKYSKALRYLAVGGDEQAIEKAQAKLEPTAVSCILNTAACKLKMQLWQEAMDSCDEA
LKLNQKNTKALFRRAQAWQGLKEYSKAMSDLKKAQEIAPEDKAIENEMKRVQIKVKEEKE
KEKQIYSKMFA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgcaacaacagtgaccaagccttcaaacaaagaaaacccccgtgtcttcttt
gatatagacattggtggtgaaagagttggccgaatggtgttcgaactgtttgctgatgtt
gtccccaaaactgctgaaaactttcgagcactctgtactggtgagaagggaactggcaaa
accacagggaaaccactccatttcaaaggatgtccattccacaggatcatcaagcaattc
atgatccagggaggcgatttctccaaccagaatggcactggaggagagagcatctatggg
gagaagtttgaagatgagaacttccattacaagcacgacaaagagggcttgctgagtatg
gccaattctggacccgccaccaatggctcccagttttttatcaccactgtgcctactgct
catctagatggcaaacacgtggtctttggacaagtcttgaaggggatggggctggtgaaa
acactggaggccatagagaccaacgaggacacacctgtcaagctgtgtgtaattgctgag
tgtggtgagcataaagatggggaggactgggcaatagcactgaatgacggctcaggggac
acccatccagactacccagaggactccaacgtcgacttaaaagatgttgacaaagtcctg
tctgttgctgaagatattaagaatattgggaacaacttcttcaagaaccaagactggcag
tctgcaatcaagaagtactccaaagctctcaggtatctggcggttggcggagacgagcag
gcgattgagaaggcccaggcgaagctggagcccacagcagtgagctgcattctcaacaca
gctgcctgtaaactgaagatgcagctctggcaggaagccatggacagctgcgacgaggca
ctgaagttgaaccagaaaaacactaaggctctgttcaggagggcccaggcctggcaggga
ctgaaggagtacagtaaagccatgagtgatctgaagaaagctcaagaaattgcaccagag
gataaagcgatcgaaaacgagatgaagagagtccagataaaagtgaaggaggaaaaggag
aaagagaagcaaatctattccaaaatgtttgcatga
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