Coregonus clupeaformis (lake whitefish): 121541441
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Entry
121541441 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like isoform X3
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121541441
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121541441
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121541441
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121541441
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121541441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
zf-UBP
UCH_1
FlhC
Motif
Other DBs
NCBI-GeneID:
121541441
NCBI-ProteinID:
XP_041706378
LinkDB
All DBs
Position
27:7864105..7915432
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AA seq
948 aa
AA seq
DB search
MSDQGDICPHLNSIGEVTKEELLQKSKGTCQSCGAGGPNLWACLQSECQYVGCGETFSDH
STLHAQANKHNLTVNLTTFRIWCYVCEREVFLEQRPAAVPTMSATHTPHHCKAMEHQVRH
RTKDAVHQPVSHHHPLKAVPIAVAEEEWSESEEDELKPRGLTGMKNIGNSCYMNAALQAL
SNCPPLTQFFLDCSGLVRTDKKPALCKSYQKLISELWHKKRPSYVVPTSLSQGIKLVNPM
FRGYAQQDTQEFLRCLMDQLHEELKEPLAECGGGGEGDERRDGGDRSPSEDEFLSCDSGA
SSDRGEGGGLGEPELLIQDECGVGPRVGGGGTGTGGPISEKERLKEKRVSGSPLHGGSQE
MDEDADVDTTAAEEGALERGAEEEEGTPPSPKPQSPSKTQGQTQSNSTREPDNEASMQQR
PQSRPCSPVRTVQELHPKLSPSPTRSSPFRSAGPAYSFKKAQLFLGAKKQKQSRYRSVIS
DIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHASIHQNLPAKTGVSLDV
YGSQGWITYIMDSIRRFVVSCIPSWFWGPMVTLEDCLAAFFAADELKGDNMYSCERCKKL
RNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLELRPFLAKDSPSQITT
YDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSS
EESMRERQKVVALASMKEPSLLQFYISREWLNKFNTFTEPGPISNHTFLCQHGGIPPNKY
HYIDDLVVILPQNVWEYLYNSFGGGPAVNHLYVCAICQVELEALIKRRKVEIDTFIRLNK
EFQAEEAPTVILCISMQWFREWESFVKGKDNEPPGPIDNSKIGVMKGGHVQLKQGADYGQ
ISEETWQYLLSIYGGGPEIAVRQTVPAPAPDTDSLHGERKIEAETRAL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccagggggacatttgtccccacctgaattccataggggaggtcaccaaggag
gagcttctgcagaaatccaagggaacctgccagtcatgtggagcaggaggccccaacctc
tgggcctgtctgcagagcgagtgtcaatatgttggatgtggagaaaccttttcagatcac
agcaccctacatgcacaggcaaataaacacaacctgacagtgaacctgaccacgttcagg
atctggtgctatgtgtgtgagagggaggtgtttctggagcagaggcctgcagccgtacct
accatgtctgccacacacactccccaccactgtaaagctatggaacaccaggtacgccat
cgcacaaaggatgcagttcatcaaccagtgagtcaccaccacccgttgaaggcggtccct
atcgcggtagccgaagaagagtggtcagagtcggaggaggatgagctcaaacccagaggt
ctgacagggatgaagaatatcggtaactcctgctacatgaacgcagcacttcaagccctg
tccaactgtcctcctctcactcagttcttcctggactgcagtggactggtgcggactgac
aagaagcctgcactgtgcaaaagctaccagaaactaatctctgagctctggcacaagaaa
cggcccagttacgtagtccctaccagtctgtcccagggcatcaagctggtcaaccccatg
ttccgtggctacgcccagcaggacacccaggagttcctgcgctgtctgatggaccagctc
cacgaggagctcaaagagccactggcagagtgtggcgggggaggggagggggatgagcgg
agggacgggggcgaccgctccccctccgaggacgagttcctctcctgcgactcgggcgcc
agcagcgaccggggggagggaggggggctgggggagcccgagctgctcattcaggacgag
tgtggggtggggccgagagttggaggaggggggacaggcacaggggggcccatctcagag
aaagagaggctgaaggagaaaagggtgtcgggctcgcccctccacgggggctcccaggag
atggacgaggacgcagatgtggacacgacagcggccgaagagggggctctggagagggga
gcagaggaggaggaggggaccccccctagccctaagccacagagtccgagtaagacacag
gggcagacgcagagcaacagcactcgagagccagacaatgaggcatcgatgcagcagcgc
ccccagtctcgcccctgcagccccgtccgtactgtccaggaactgcaccccaaactctcc
cccagccccactcgctccagccccttccgctctgcagggcccgcatactcatttaagaaa
gcccagctgttcctgggtgccaagaagcagaagcagtctcgctaccgcagcgtcatctca
gacatcttcgacggctcaatcctcagcctggtccagtgtctgacttgtgacagggtgtcg
accacagtggagaccttccaggacctgtccctgcccatcccaggtaaggaggacctggcc
aagctacacgcctccatccaccagaacctccctgccaagaccggggtgtctctggatgtc
tacggttcccagggctggatcacctacatcatggactccatacgcaggtttgtggtgtcc
tgtatccccagctggttttggggtcctatggtcacactggaggactgcctcgctgccttt
ttcgctgctgatgagctcaaaggggacaacatgtacagctgtgaaaggtgtaaaaaattg
agaaatggtgtaaaatattgcaaagtacttcggctacctgagatcctgtgtatccacctg
aagcgttttcgccatgaggtgatgtactccttcaaaatcaacagccacgtgtccttccca
ttggagggcctcgaactccgacctttcctggccaaggacagcccctcccagatcacaacc
tatgacctcttgtccgtcatctgtcaccatggcactgcaggcagcggtcactacatagcg
tactgtcagaacgtgattaacggtcagtggtatgagtttgatgaccagtatgtaacggag
gtccatgagacggtggtgcagaatgctgaggcctatgtgctcttctacaggaagagcagt
gaggagtcgatgagggagaggcagaaggtggtggctttagctagcatgaaggagccaagc
ctgctgcagttctacatctccagagagtggctgaacaagttcaacactttcactgagcca
ggacccatcagcaaccacaccttcctctgccagcacggagggatcccgcccaataaatac
cactacattgacgacctggtggtgatcctgccccagaacgtgtgggagtacctgtacaac
agttttggaggaggtccagcagtgaaccacttgtacgtgtgtgccatctgccaggtggag
ttagaggctctgatcaaacgcaggaaggtggaaatagacacctttatcaggttgaataaa
gagttccaagcggaggaggctcctacagtcatcctgtgtatcagtatgcagtggttcaga
gagtgggagagcttcgtcaagggcaaagacaacgagcccccaggtcctattgacaacagt
aagattggtgtcatgaaagggggacacgtacagctcaagcaaggggctgactatggtcag
atttcagaggagacgtggcagtatctcctcagtatctatggtggagggcctgagattgca
gtgagacagacagtgccggccccggcccccgacacagacagcctgcatggagagaggaag
atagaggcagagaccagggcactctga
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