Coregonus clupeaformis (lake whitefish): 121541457
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Entry
121541457 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165-like isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121541457
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121541457
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121541457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
RINGv
zf-RING_16
Prok-RING_4
zf-Nse
zf-RING_10
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121541457
NCBI-ProteinID:
XP_045063976
LinkDB
All DBs
Position
27:12678095..12697157
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AA seq
389 aa
AA seq
DB search
MVLIHVGYLVLPVFGSVRNRGAHFTRHQHSHATSCRHFNLGAPQAPISAEFPVGHASQPP
QTGLAPHLSTAPHHPPPLTALPAPPQFQDIPGPPFLPQALHQQYLIQQQLLEAQHRRILP
HSRRTPERVPLNPHRLRSGYDYSPPLHVPQPISQQPRYLAEGTDWDLSVDAGLSHHQYQL
QQLPQHYQHYLASSPRMHHFPRNTTSAQVVVHEIRNYPYPQLHLLALQGLNPSRHASAVR
ESYEELLQLEDRLGSVSRGAVQTTIERFTFPHKYKKTKKTSSRSEGLQVSDRATSPLKHD
SKSPQLQKLIIDTQAQRKPLEMKVGEKEEETDVDEKCTICLSMLEDAEDVRRLPCMHLFH
QGCVDQWLATSRKCPICRVDIETQLHPDS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaatacatgtcggatatttggttcttcccgtatttggctctgtaagaaataga
ggagcacacttcaccagacatcagcacagccatgctacctcctgccgacactttaacctg
ggggccccccaggctcccatctcagccgagttccccgtgggtcatgccagtcagcctccc
cagactggcctggcccctcacctgtccacagccccccaccaccctccgcccctgacggcc
ctgccggccccccctcagttccaggacatcccggggcccccgttcctacctcaggcctta
caccagcaatacctcatccagcagcagcttctagaggcgcagcaccgcaggatcctccca
cactccagacgaacaccggagcgcgttcctctgaaccctcacaggctgcgctcggggtat
gactactcccctccactccacgttccccagccaatcagccagcagccgcgctacctggcc
gagggcacagactgggacctcagtgtggacgctggcctctctcaccatcagtaccagctc
cagcagcttccacagcactatcagcattacctggcctcatcccctagaatgcaccacttt
cccaggaacaccacctctgcacaagtggttgtgcacgagatcagaaactatccgtacccc
cagctccacctgctggctctacagggcctcaacccctcacgccatgcttcggctgtacga
gagagctatgaggagctgttgcagcttgaagacaggctgggaagtgtcagtagaggggca
gttcagaccaccatagagagattcaccttcccacacaaatacaagaagaccaagaagaca
tcctcaaggtctgagggcttacaagtctcagacagggctacctcaccactaaagcatgat
tccaaatcacctcaactacaaaaactcatcatagatacacaagcacagagaaagcctctg
gagatgaaggttggtgagaaagaggaggagactgatgtggatgagaaatgtaccatctgc
ctatccatgctggaggatgcagaggatgtcaggcggttaccctgcatgcacctcttccac
cagggctgtgtggaccagtggctggcgaccagcaggaagtgtccaatctgccgcgtggac
atcgagacgcagctccatcccgacagctga
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