Coregonus clupeaformis (lake whitefish): 121541474
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Entry
121541474 CDS
T08357
Symbol
twnk
Name
(RefSeq) twinkle protein, mitochondrial
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121541474 (twnk)
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121541474 (twnk)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
121541474 (twnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_29
AAA_19
AAA_16
AAA_23
T2SSE
TsaE
nSTAND3
ABC_tran
NACHT
Motif
Other DBs
NCBI-GeneID:
121541474
NCBI-ProteinID:
XP_041706484
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All DBs
Position
1:21276690..21288272
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AA seq
743 aa
AA seq
DB search
MWMSWFLKGTTCLLQVAARSTPRLPPQRGLSSSLVRILTKPRTPRFAIPPYYPPGQLWGM
SLPISCTRSYKKDTKSILDFPVDPITVTDIKQYLRSKDIPFHDGYSCLHAPSIFLDSAVC
VPADTGKESFTMFIDKTTGQFLCKETLVEGSWEDLQDCLEVMQKEGQASLSPHVLLGYPE
SLEEREEKEQELREVQRIWSSAVPFSDLPDEEAQLVKTMFQIGKISNATLKKFAVRLFKP
TKSLVFPWFSGRDSSLRGIKLLSAQSMESGTVAYTEAMVPKAGSYHNLFGLPLVGRMDSE
VVLTGQEVDTLAVSQATGLPSVALPRGVNTLPPALLPYLEQFKRVTLWLGGDMRSWEASK
IFSRKLGLKRCSLVRPGEFQPCPVEALFQGRNLARIVKASIPAAHKSIVSFRQLREDVYG
ELANTEQVAGVKWTRFPELNRIMKGHRKGELTVFTGPTGSGKTTFISEFALDLCMQGVNT
LWGSFEINNVRLAKIMLTQFAMQRLEENLDQYDSWADRFEDLPLYFMTFHGQQNIKAVLD
TMQHAVYLYDISHVIIDNLQFMMGQENLSVDKFAVQDHIIGAFRKFATNSSCHVTLIIHP
RKEEDDRELQTASIFGTAKASQEADNVLILQEKKLVTCPGRRSLQVAKNRFDGDVGIFPL
EFNKASLTFSAPVKGKLKLRKVKGEGSDNEETLGETLKKEETTVKKEKLVKLERPPKATK
TPRAVKSPAAGKGTPEGEGKKQP
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgagctggttcctgaaagggaccacctgtcttttgcaggtggcagcccgcagc
accccaaggctgcctccccaaagaggcctctcttcctccctagtcagaatcctaaccaag
ccacgcactccaagatttgctattcctccatactatcctccgggacaactatgggggatg
tcattgccaatcagttgtaccaggagctacaaaaaggataccaagtctattctagacttt
cctgtcgaccctattacagtgaccgatatcaaacaatatctgcgctctaaagacatccca
ttccatgatggctacagctgcttgcacgcccccagcattttcctggactcggctgtgtgt
gtccctgcggatacagggaaggagagctttacaatgttcattgacaaaaccacaggccaa
tttctgtgcaaggagaccctggtggaggggagctgggaggacctgcaggactgcctggag
gtgatgcagaaggagggccaggcctccctcagccctcacgtgctgctgggctaccccgag
agcctggaggagcgggaggagaaggagcaggagctcagggaggtgcagaggatctggtcc
agtgccgtgcccttctcagacctccctgacgaggaggcgcagctagtcaaaaccatgttc
cagatcggcaagatctccaacgccacgctcaaaaagtttgcggtgaggttattcaagccc
accaagagcctggtgttcccctggttcagtggaagggactccagcctgcggggcatcaag
ctgctatctgcccagagcatggagagcgggacggtagcttataccgaggccatggtgccc
aaggctggctcctaccacaacctgtttgggctgcctctggtgggacgcatggactccgag
gtggtgctgacaggccaggaggtagacaccctggcagtgagccaggccacaggcctgccc
agcgtggctctgccccggggtgttaatactctgcccccagccctcctgccctacctggag
cagttcaagcgggtcaccctgtggctgggaggggacatgcgctcctgggaggcctccaag
atcttctccaggaagctgggtcttaagcgctgctccctagtgcgcccgggggagttccag
ccctgtcctgtggaggccctgttccagggcaggaacctggcccgtatcgtcaaagcctcc
atacccgccgcccacaagtccattgtgtccttcaggcagctcagggaggatgtctacggg
gagctggccaacactgaacaggtggctggggtgaagtggaccaggtttccagagctcaac
aggatcatgaagggtcatcgcaaaggggaactgacagtcttcacaggacccacgggcagc
ggcaagaccaccttcatcagtgagtttgccctggacctttgcatgcagggcgtcaacacg
ctgtggggcagctttgagatcaacaacgtgcgcctagccaagatcatgctgacccagttc
gccatgcagaggctggaggagaacctggaccagtacgactcgtgggccgacaggttcgag
gacctgcccctctatttcatgaccttccatgggcagcagaacatcaaagctgtgctggac
accatgcaacatgctgtctacctttacgacatcagtcacgtgatcattgacaacctgcag
ttcatgatgggccaggagaacctctctgtagacaagtttgccgtccaggaccacattatc
ggagctttcaggaagtttgccaccaacagcagctgtcacgtcactctgatcatccacccc
aggaaagaggaggatgacagagaactacagacagcgtccatctttggaacggccaaggcc
agccaggaggcggataacgtgctcatcctgcaggagaagaagctggtgacatgccccggc
cggaggtccctccaggtggccaagaaccgtttcgacggagacgtgggcatcttccctctg
gagttcaacaaggcctcgctcactttctctgccccggtcaagggcaagctcaagctgaga
aaggtcaagggggaggggtcagataatgaggagacattaggagaaactctaaagaaggag
gagacaacggttaagaaggagaaactagtgaagttggagaggccacccaaagctaccaaa
acgcccagagctgttaagagtcctgcagcagggaagggcacaccagagggagagggaaag
aaacagccatag
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