Coregonus clupeaformis (lake whitefish): 121541490
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Entry
121541490 CDS
T08357
Symbol
si:dkey-237h12.3
Name
(RefSeq) teneurin-3 isoform X1
KO
K24473
teneurin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121541490 (si:dkey-237h12.3)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
121541490 (si:dkey-237h12.3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
Ten_N
EGF_TEN
EGF_Teneurin
GBD_Tenm3
Teneurin_ABD
FN-plug_TEN1-4
TTR_TEN1-4
Tox-GHH
RHS_repeat
EGF_2
NHL
EGF
RHS
Motif
Other DBs
NCBI-GeneID:
121541490
NCBI-ProteinID:
XP_041706485
LinkDB
All DBs
Position
3:19328473..19511548
Genome browser
AA seq
2730 aa
AA seq
DB search
MEQVKEQQPFCSLSKSQRDRERDLERERDRERRYTASSTDREGACRVPTQKSYSSSETLQ
AYDHDPARLLFSGRVKEVAHQDTNDYSRPGQTFSLRQLGICQASTRRGLALCPETGLSHP
LGSYSRGTVPTENQETTSPERTMALWGRGAKSGQSSCLSSRSNSALTLTDTEMDNKSDNE
IGDQLSSQQGPPPLPPAPPPHHKQHPSITSLSRGSLANQRSPSPPPSAGLAADLQSAAEC
VQLQDSWVLGSNVALESRHFLFKTGTGITPFFSTATPGYTMATGAVYSTPARPLPRNTLS
RGAFKFKKSPKHCSWRCTALSAVGVAVLLSIILCYCIAMHFFGLNWQLQETENKPAFENG
GGKAFPTQPSIVTVLSADYGRTGAVHQENNSIDTGQVEVGRRVGQGIPPGVFWRSRLAME
QPRFLKFNISVQKNALVGAYGRKGLPPSHTQYDFVELLDGSRLIAKEMWAPTAPETRGRM
ERQVSLHQAGFIQYLDSGVWHLAFYNDGKSPETVSYNTIILESVMECSHNCYGNGECVSG
SCHCFPGFIGPYCSRAACPILCSGNGRYTRGHCQCYSGWKGTECDVPTTQCVDPQCGGHG
ICVTGNCVCNAGHKGSNCHQVDCLDPTCSGHGACHHSECHCNPGWGGIGCEILKSTCPEQ
CSSHGTFHTETGTCVCEANWTGSDCSLEVCTVDCGPHGVCVSGTCHCEEGWAGSECDQRD
CHPRCTDHGVCREGKCDCHQGWTGEHCTIALDSRVSGAVKIGYKDGCPGLCNSNGRCVLD
QAGWRCICQSGWRGLGCDVATETLCSDGKDNEGDGLVDCMDPDCCSQSSCQGQPYCRGSP
DPTSIVGQGQGSSSTQSAPRGFYAHVSFLVRPGGSHVIPGDNPFNSSLASIIRGLVLTGD
GTPLIGVNVSFRDYPEYGYTITRQDGMFDLLANGGASLTLSLKRAPFPTLHRTVWLPWKV
FHVMDTVVMKREDNDIPSCYLSGLLRPSPIILASPLSTFYRSSPEDSPIIPETQVLHEEV
AIPGSDLNLVYLSSRTSGYKPILKVLMTQERLPFGLMMVHLMIAVMGRLFQKSFPAFPDL
SYTFVWDKTDAYNQKVYGLSEAVVSVGYEYESCLDMILWEKRTAILQGYELDASNMGGWM
LDKHHILDIQNGILYKGSGENQFISLQPPVISTVMGNGRRRSISCPSCNGQAMGNKLLAP
VALAWGIDGSLYVGDFNYIRRIYPSGNVTSVMELRNKDFRHSNNPAHRYYLATDPVTGQL
YVSDTNSRRIYRPKVLMGIKELQSNAEVVAGTGEHCLPFDETHCGDGGKATEALLTGPKG
IAVDKNGLIYFVDGTTIRRVDQSGIISTLLGSNDLTSARPLTCDISMDINQVLLEWPTDL
AVSPMDNSLYVLDSNVVLRITENGQVSIAAGRPIHCPLAGMDRGGQRAAQTPLESAVAIA
VSYHSAIFVAETDERKLSRIRTVSVDGEITHLVGSPSDCDCKNDVNCDCYQTGDGYAKDA
RLNAPSSLVVAPDGTLYVADLGNIRIRAVGRNGPALTSNANTFEVASPDAQEVYVFDTNG
THLHTTNLMTGDFKYTFSYSTENDVTAMTDSNGNTLRIRRDPNRMPVRIVAPDNQVIWLT
MGTNGGLKTLTAQGQELVLLTYHGNTGLLATKTSEIGWTTFYDYDSEGKLMNVTFPTGTV
NNLYTDIYRALTVDIESSLTEEEISITTNTTTIRAFYTLAQDQCRSSYQVGYDNSLRITY
ANGMDTHYQTEPHILAGTANPTVARRNMSLPGESGQNLVEWRFRKEQARGKVIVFGRKLR
VNGRNILSVDYDRTLRTEKIYDDHRKFLLKIIYDGAGHPVLWVPSSKLLPVNVSRSSNGQ
ISALQRGATSERLEYDAQGRVVSRVFADGKTWSYTYLDKSMVLLLHSQRQYIFDFDSLDR
LSAVTMPSVARYTMHTVRSVGYYRNLFHPPESNASVAVDYSEDGLLQRVVHLGTGRRILY
KYRRQNKLAEVLYDSTRVSFTYDEMAGVLKTVNLQSEGFICSIRYRQVGPLVDRQIFRFS
EDGMVNARFDYTYDSSLRVTSVQGVINETPLPIDLYQFDDISGKVEQFGKFGVIYYDINQ
IISTAVMTYTKHFDAHGRIKEIQYEIFRSLMYWITFQYDDVGRCTKREIKIGPFANTTKY
GYEYDVDGQLQTVYLNDKVMWRYTYDLNGNLHLLNPGNSARLLPLRYDLRDRITRLGDVQ
YRMDEDGFLRQRGSEIFDYNSKGLLARVYSKGNSWTIQYRYDGLGRRVSTKTNLGQHLQY
FYADLSYPSRITHVYNHSSSEITSLYYDLQGHLFAQEISSGEEYYIACDNTGTPLAVFTS
NGLLIKQVQYTAYGEIYFDSNPDFQLVLGFHGGLYDPLTKLLHFGERDYDIMPGRWTVPD
INTWKRVGKEPGPFNLYMFRNNNPISKVHEVREYVADVNSWLVTFGFHLHNTIPGYPVPK
FDLTHPSYELKKSQLWDDLPSISGVQQEVTRQAHALLTFERLPEVHAGRGRRGEKPWFWF
SAAQSPIGRAVMFAIYKGTAHTQTLNVANEDCIKVATVLNNAFYLEDLHFTVEGHDTHYF
VKPGLPDSDLAALRLTSGHKTLENGVNVSVSQSTTVMDSRTRRFADVELRRGALALHVRY
GSTVDEEKARVLELARQRALMSVWAREQQRVRDGEEGVRPWTEGEKRQLLSSGKVLGYDG
YYALSIEQYPELADSANNIQFLRQSEIGKR
NT seq
8193 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggtgaaggagcagcagcccttctgctcactctccaagagccagagagaccgg
gagagagaccttgaaagggagagggatcgggaacggcgttacaccgcatcatcgacagac
cgagaaggggcctgccgcgtgcctacccagaagtcctacagctctagtgagacgctgcag
gcctacgaccatgaccccgcccggctgctgttctcaggccgagtcaaggaggtggcccac
caggataccaatgactacagcaggccaggacagaccttctcactgaggcaacttgggata
tgtcaggcctccacacgcagaggcctggccctctgccctgaaacgggcctctcgcacccc
cttggtagctactccagaggaacggtccccacagagaatcaggagaccacatccccggaa
cgtaccatggctctctggggcaggggtgccaagtcaggccaaagctcatgcctgtctagt
cgctccaactcggcccttaccctgacagacaccgaaatggacaataagtcggacaacgag
atcggagaccaactgtccagtcaacaaggcccgcctcctctaccaccagctcctccccct
caccacaaacaacacccgtccattacgtcgttgagccgcggctcgctggccaatcagcgg
agcccaagccctcccccctcggctggcctagcggccgatttgcagagcgcagcagaatgt
gtccagctgcaggacagctgggtcctgggcagcaatgtggccctggagagcagacacttc
ctctttaagacgggcacaggaataacccctttcttcagcacggcaaccccaggttacacc
atggcaactggggcggtgtactccaccccggcacgtcccctacccagaaacaccctctcc
agaggggctttcaagttcaagaagtcgcccaagcactgctcctggaggtgcactgccctg
agtgcagtgggcgtggctgtcctactgtcaatcatcctctgctactgtatagcaatgcac
tttttcggcctcaactggcaacttcaagaaacagaaaacaaaccggcgtttgagaacgga
ggggggaaggcttttcccactcaaccaagcatagtgacagtactctcagctgactatggc
agaactggtgcggtccatcaggagaacaactccattgacaccgggcaagtggaagtgggc
cggagggtaggtcagggaataccgccgggggtgttctggcgctctcggctggctatggag
cagccacgcttcctcaagtttaacatctctgttcagaagaatgcactggttggggcctat
gggaggaagggtctgccaccatctcacacccagtatgactttgtggagctgctggatggc
agcaggctcatcgccaaagagatgtgggctcccacggcgccggagaccagggggcggatg
gagcgccaggtcagcctccaccaagctggcttcatccagtatctggactctggggtgtgg
catctggccttctacaatgatgggaagagcccggagacagtatcatacaacaccatcatc
ctggagtcggttatggagtgctcacacaactgttatgggaatggagagtgtgtgtcaggc
tcctgccactgtttcccagggttcattgggccatactgctcaagagctgcctgtcccatc
ctatgcagtggcaatggccggtacactagggggcactgtcagtgctacagtggatggaag
ggcacagagtgtgacgtgcctactacccagtgtgtggacccccaatgtggcggccatggg
atctgtgtgacgggcaactgtgtgtgtaatgccggccacaagggaagcaactgtcaccaa
gtggactgtctggatccgacctgctcgggccacggagcctgccaccacagtgaatgccac
tgtaacccgggctggggcggaatcggctgtgagatcctgaagagcacgtgtcctgaacag
tgctccagccacggaaccttccacaccgagacaggcacctgcgtctgtgaggctaactgg
acaggctccgactgctctttagaggtgtgcacggtggactgcggcccccacggagtgtgt
gtcagtgggacctgtcactgcgaggagggatgggcaggctcagagtgcgaccagagggat
tgtcacccacgatgtacagaccatggtgtctgccgagagggcaaatgtgactgtcaccag
ggctggaccggagagcactgcaccattgctctggattcaagagtatcaggagcagtcaag
ataggatataaagatgggtgccctgggttgtgcaacagcaacgggaggtgcgtactggac
caagccgggtggcgttgcatctgccaatcaggatggagagggctaggatgtgacgttgcc
acggagaccctctgctcagatggaaaggacaatgagggggatggactggtggactgcatg
gacccagactgctgttcacagagctcctgccagggccagccctactgccgcggatcccca
gaccccacaagcattgtgggccaaggtcaagggtcatcctccactcagtcggcccccagg
ggcttctacgcacacgtcagcttcctggttaggcctggcggtagtcatgtgatacctggg
gacaaccctttcaacagcagcctggcgtcaatcatccggggtctggtgctgacgggagac
gggacgcccctgatcggagtcaacgtgtccttccgggactacccagagtacggctacacc
atcacgcgccaggacggcatgtttgacctgttggccaatggcggtgcctcgctgacgctg
agtttgaagcgtgccccttttcccacactgcaccgcaccgtgtggttaccctggaaggtg
ttccacgtgatggacactgtggtgatgaagagggaggacaacgatatccccagctgttac
ctcagcggcctgctcaggcccagccccatcatcctggcctcgcccctgtccaccttctac
agaagttcccccgaggacagccccatcatccctgagacccaggtcctacacgaggaagtg
gccatacctggaagtgacctcaatctggtttacctgagctcccgcacgtccggctacaag
cccatcctcaaagtcctcatgacccaggaacgactcccgtttggactcatgatggtccat
ctgatgattgctgtcatgggcagactgttccagaaatcgttccctgcttttcccgacctc
tcgtataccttcgtctgggacaagacagacgcctacaaccagaaggtctacggcttgtca
gaggctgtagtgtctgtgggatatgagtatgaatcatgcctagatatgatcctctgggag
aagaggacagccattttacaaggttatgaactggacgcctccaacatggggggatggatg
ttggacaagcaccatatattggacattcaaaatggcatcctctacaaaggcagcggtgag
aaccagttcatctcgctgcagcctcccgtcatctctacagtgatggggaacggtcggcgc
cgcagcatctcgtgccccagctgcaacgggcaggccatgggcaacaagttgctggcgccc
gtggccctggcgtggggcatcgacggcagcctctatgtgggcgatttcaactacatcaga
cgcatctacccgtcgggcaacgttaccagcgtcatggagctcagaaataaagattttaga
cacagtaacaaccctgctcaccgctattacctggccaccgacccagtgactgggcagctg
tatgtgtccgacaccaactcacggaggatctaccggcccaaggtcctgatggggatcaag
gaactgcagagtaacgcagaggtggtggcagggaccggggagcactgtctgccctttgac
gagacccactgtggggatgggggcaaggccacggaggccctgctcactgggccaaaaggt
atcgctgtggacaagaatggactgatatactttgtggacggcaccacgatccggagagtt
gaccaaagcggcatcatatccacactcctgggctccaatgacctcacgtcggcacgcccc
ctgacctgtgacatcagcatggacatcaatcaggtactcctggagtggcctaccgaccta
gcggtcagccccatggataactccctgtacgtcctggacagcaatgtggtccttcgaatc
actgagaacggccaggtcagcattgcagcgggccggcccatccactgcccgttggccggg
atggaccgcggaggtcaaagggcagcacagacgcccctggagtctgccgtggccatcgct
gtgtcctaccacagcgccatcttcgtcgccgaaaccgacgagcggaagctgagccgaatc
cgaactgtgtccgttgacggtgaaataacccatctggtggggtcgccgtccgactgcgac
tgtaagaacgatgttaactgtgactgttaccagacgggcgatggctacgccaaagacgcc
cgtctcaacgcaccgtcctctcttgtcgtggcacccgatggcaccctatatgtggcagac
ctgggcaacatccgcatccgggcagtcggtaggaacgggcctgcgttgacctccaacgcc
aacaccttcgaagtggcatcgccggatgcccaggaagtgtacgtctttgacaccaacggg
acccacctacacaccaccaacctcatgacaggtgacttcaagtacaccttcagctacagc
acggagaacgacgttaccgccatgaccgatagcaacggaaacaccctgagaatccgccgt
gaccccaaccgcatgcccgtgcgcatagtcgcccctgacaaccaggtcatctggctgacc
atggggaccaacggtgggctgaagaccttgacggctcagggccaggaactggtgctgctc
acctaccatggtaacactggcttgctggctaccaagacctctgaaattggctggaccaca
ttctacgactatgacagcgaaggcaagctaatgaacgtgacgttccccaccggaacagtg
aacaacctgtacaccgacatctacagggccttgaccgtggacattgagagttccttgact
gaagaggaaattagcattaccaccaataccaccaccatccgtgccttctatacattggct
caggatcaatgtagaagcagttatcaggttggctatgataactctctgaggatcacctat
gccaatggaatggacacccactaccagactgagccccacatcttggcgggcactgccaac
cccaccgtggcacggcgtaacatgagtttgccaggggagagtgggcagaatctggtcgag
tggcgcttccgcaaggagcaggccaggggaaaagtcatcgtttttgggcgcaagctaagg
gtgaacggacggaacattctgtcggttgattatgaccgtacgctgaggacggagaagatt
tacgacgaccacaggaagttcctgctgaagattatctatgacggcgcgggccaccctgtg
ctatgggtccccagcagtaagcttctgcccgtgaacgtcagccggagcagcaacgggcag
attagtgccctccagaggggggcgaccagcgagcggttggagtacgacgctcagggacgc
gtcgtttccagagtgtttgctgacgggaagacgtggagttacacatacctggacaagtca
atggtgctcctgctccacagccagcgtcagtacatcttcgactttgactctctggaccga
ctatctgccgtcaccatgcccagtgtggcccgctacaccatgcacacagtccgctcagtg
ggctactaccgcaacctcttccacccgcctgagagcaacgcctctgtagccgtggactac
agtgaggatggcctcctgcagcgagtggtgcacttgggcacgggccgccggatcttatac
aagtaccgacggcagaacaagctagccgaagtcctgtacgacagcacgcgggtcagcttc
acgtacgatgagatggcaggcgtgctgaagacggtcaacctgcagagcgagggcttcatc
tgttcgatccgttaccgccaagtgggccccctggtggaccggcagatcttccgcttcagc
gaggacggaatggtcaatgcccgcttcgattacacctatgacagcagcctgcgagtcacc
agcgttcagggcgtcatcaacgagacgccgctgcccatcgacctctaccagttcgacgac
atctctggcaaggtcgagcagttcggcaagttcggcgtcatctactatgacatcaaccag
atcatctccacggccgtcatgacctacaccaagcactttgacgcccacggccggatcaag
gagatccagtacgagatcttccgatccctcatgtactggatcaccttccagtatgatgac
gtgggacgatgcactaagagggaaatcaagattgggccgttcgccaacaccaccaagtac
ggctacgagtacgacgtagacggccagctccagacggtctacctcaacgacaaggtcatg
tggcgctacacctacgacctgaatggcaacctccacctactgaacccaggcaacagcgcc
cgactgctacctctgcgctacgacctccgtgaccgcatcacccgcctgggagatgtgcag
taccgcatggacgaggatggcttcctccgccagcgaggttccgagatcttcgactacaac
tccaagggcctcctggcacgcgtatacagcaagggcaacagctggaccatccagtaccgc
tacgatggcctgggccggagggtgtccaccaagaccaacctggggcagcacctgcagtac
ttctatgcagacctgagctaccccagcaggatcacccacgtctacaaccactccagctct
gagatcacctccctgtactatgacctgcagggacacctgtttgcccaggagatcagcagc
ggagaggagtactacatcgcctgtgacaacaccggaacccctctggccgtattcaccagc
aacggcctcctgatcaagcaggtccagtacacagcgtacggggagatctactttgactcc
aacccggactttcaactggtgctggggttccatggggggctctatgacccgctgaccaaa
ttgttgcattttggtgagagggactatgacattatgcccggcaggtggactgtgcctgac
atcaacacctggaaacgagtggggaaagagcctggtccttttaatctctacatgttcaga
aacaacaaccccatcagcaaagtacatgaagtgagagagtatgttgcagatgtgaatagc
tggctggtgacctttgggttccatctacacaacaccattcctggctacccagtcccaaag
tttgatctgacccacccatcttatgaactgaagaagagccagctttgggatgatctaccg
tccatctctggggtccagcaggaagttaccagacaggcgcatgccctcctgacgtttgag
cggctgccggaggttcatgcgggccgaggccgcagaggcgagaagccttggttctggttt
tcagcagcccagtcccccatcgggagagccgtcatgttcgccatctacaagggcactgcc
cacactcaaacgctcaacgtagccaacgaggactgtatcaaggtggccaccgtcctcaac
aatgccttctacctggaagacctgcacttcaccgtggaaggccacgacactcactacttc
gtcaagcccggcctgcccgacagcgacctggcggcgctgcgcctcaccagcggccacaag
accctggagaatggcgttaatgtcagcgtgtcccagtccaccacggtcatggacagccgg
actcggcgcttcgcagacgtggagttgcggcgcggggcgcttgcgctgcatgtgcgctat
ggctccacggtggacgaggagaaggcccgcgtgcttgagttggcccgccagagggcgtta
atgagtgtgtgggccagggaacagcagagggtgcgcgacggcgaggagggcgtccgccca
tggacagagggagagaagaggcagctcctgagcagtgggaaagtgctggggtatgacggg
tactacgcactttccatcgagcaatatccggagttagcggacagcgctaacaacattcag
ttcctacggcaaagtgaaatagggaaaaggtaa
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integrated database retrieval system