Coregonus clupeaformis (lake whitefish): 121541494
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Entry
121541494 CDS
T08357
Name
(RefSeq) prostaglandin E2 receptor EP4 subtype-like
KO
K04261
prostaglandin E receptor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121541494
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121541494
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121541494
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Lipid
Prostaglandin
121541494
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Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
NdhL
YtzI
Motif
Other DBs
NCBI-GeneID:
121541494
NCBI-ProteinID:
XP_045063966
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Position
27:complement(9618349..9624607)
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AA seq
475 aa
AA seq
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MSGMNNGRMTSGSREPTIPVIMFIFGVVGNVIAIVVLRKSRKEQKETTFYTLVCGLAVTD
LLGTLLASPVTIATYVQGKWPGGESLCQYSGFILLFFFLVGLSIICAMSIERYLAINHAY
FYNHYVDQRLAALTLAGIYIFNVMFCALPAMGLGKVNNQFPGTWCFIDWRTNDSTHAAFS
YMYAGVSSFLILATVICNVLVCGALIMMHKRFIRRTSLGTDQGGRIADLRRRRSFQRLAG
AEIQMVILLIATSVVVLICSIPLVLRIFVNQLSRFEFDARSTPIEKNPDLHAIRIASINP
ILDPWIYILLRKTVLLKLVEKIKCLFCSLGSRGRGSGAWGQFCCGGEGHLNSSIVSQDSP
SLVSCELRDVISTSQTFLYLPEGTRGGQGGFRGTGGEGRPSLPAVERSLLQDQQTPAGMG
MQKDPKKGTLGPRISMRSEGTVDPSRLNRVPTDRKDKTLHVTFTDETLNLQEKCI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtatgaataatggcaggatgacaagtgggtcccgggagcctactatcccggtg
attatgttcatattcggagtggtgggtaacgtcatcgccatcgtggttctccgaaagtct
cggaaggaacagaaggaaaccacattttacaccctggtgtgcgggcttgcagtgaccgac
cttttgggaacgctactggccagccccgtcaccatcgccacctatgtgcaagggaagtgg
ccgggtggagagtcactgtgtcagtactccggcttcatccttctcttcttctttctagtc
ggcctcagcattatctgtgctatgtccatagagagatacctggctataaaccatgcatat
ttctacaaccattacgtggaccaaagacttgcagcgttgacgcttgcgggcatttacatt
tttaacgtgatgttctgcgcactgcctgccatggggctggggaaagtgaataatcagttc
ccagggacgtggtgcttcatcgactggcggactaacgactccacgcacgccgccttctcc
tacatgtacgccggggtgagctcctttcttatcctggccacggtgatatgcaacgtgctg
gtatgcggggcgctgattatgatgcacaagcggttcatccgcaggacatcgctgggtacg
gaccagggaggacgcatagcggacctgaggcgcagacggagcttccaacgcttggccggc
gcagagatccagatggtgattctgctcatcgctacctccgtggtggttctcatctgctcc
atacctttggtactgcggatttttgtaaaccagctgtccaggtttgaatttgacgcccgt
tcaactcccatagagaagaacccagatctccacgccatccgcattgcctccatcaacccc
atcctcgacccctggatctacatcctgctgaggaagaccgttctactgaagctggtggag
aagatcaagtgtctgttctgcagcttgggcagccgggggcggggctcaggggcatggggt
caattctgctgcggaggtgaaggtcacctgaattcgtccatcgtgtcccaggactcccca
tcgctagtgtcctgcgagttgagggacgtcatcagcacctcgcagacatttctttacctt
ccggaggggactagaggggggcagggggggtttagagggacagggggcgagggaagacct
agcctccctgctgtggagcgctccctgctccaggaccaacagacaccagcgggtatggga
atgcaaaaggatcccaaaaagggcactttaggacccaggatatcaatgagatcagagggg
acagttgacccttcacgtctgaacagggtgccaacggaccgaaaggacaagactctacat
gtgacatttacagacgagacactgaacttacaggagaaatgcatctga
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