KEGG   Coregonus clupeaformis (lake whitefish): 121541497
Entry
121541497         CDS       T08357                                 
Name
(RefSeq) laminin subunit gamma-3
  KO
K06247  laminin, gamma 3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121541497
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121541497
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN Laminin_B JAG1-like_EGF2
Other DBs
NCBI-GeneID: 121541497
NCBI-ProteinID: XP_041706488
LinkDB
Position
27:9215278..9439327
AA seq 1620 aa
MDTPLTTPLLLLCSLSFVHGAMDSCYDDDEGVPSRCMPKFENAAFNRTIMASNVCGSPPE
DYCMQTGSTRSCHHCSISDTGLSHNASLLTDFHTDEEPTWWQSQSMFYRVQHPNSVNLTL
HLGKAFEITYVRLKFYTSRPESFAIYKRTSEDGPWTPYQYYSASCSKTYGKNAKGYIRPG
DDERMAVCTDEFSDISPLSGGNVAFSTLEGRPSAYNFDQSAVLQEWVTATDLLISLDRLN
TFGDEFFKDAKVLRSYFYAISDFSVGARCKCNGHGSECVLDEQGALVCDCQHHTAGVDCQ
KCHPFYQDRPWARATGDSANQCMKCNCSGRADACVFDAEQYRSTGSGGRCVDCRDHTDGP
HCERCKENHYRRSPQDLCRPCDCNAIGSVSLQCGAEGMCMCRPSVTGEKCDTCQPGFHSL
SPGGCRSCDCEPRGSVGICSTLDGGCHCKENVEGQACDRCKPGSFNLLENNPAGCMSCFC
FGHSLACRSSNRHAAVNITSDFLEDPDGWSGQFSGGQEYPLLWKEGEVYLLPLSEDDLGF
YRAPEKFLGNHLLSYGQLLSLTFTAEAQCLLPHSVTVLLEGSGTTLSADLSPQPGLVHQP
GLAPQHTFTLRLHEEETRLRPFLSAFEFQCLLFNLTAFRISNAGGHNYTSQLSEVTLASA
APSSSPVTPSTPPAPWVEVCTCPPGFGGQFCELCAPGYTREVPNGGPLSPCVPCTCHQHG
PCHPETGVCECADFTTGPNCEHCLGGYYGNALIGTTNDCRTCPCPDRTSCAQMMEMGDVV
CTNCPPGQRGTRCEMCEDGFHGDPLGRSGLVRQCERCDCNGNVDPNALGVCDHMTGRCIK
CLGHTEGDHCQRCRRGYYGDAMDRTMARKCKPCDCSPAGTSGLLEDCDPQTGSCQCLSHV
TGGNCGQCSVGFFNLQPGVGCERCNCNPIGSSSTACHQITGQCVCRPGVEGRLCSTCRMG
FFDFSSRGCRACNCNPMGSSSMQCHTNGTCPCRHGFVGYKCDQCELNYFHNRATHQCEEC
PICYGLVKEQAGKLKARLQNLEKLLARFDCRSDYGRQHHVREYHVRQHHERGHQGEDSLP
NALEEFLAIQEAKEAFVEQFALLELSTHTLSAQLHTVTTAMNCSASMEEEQKEEEKEEGW
RTLCRTLADSVSVVRSARTQLKQATLDLDNMVIPFKVTTVPNRWNSAVNESEGLMKSHTE
MAGRIESIATKAFMASNQTYSLLMDLLEDNSTEEYISNLTEQMADMQQMKENLTAQVNET
VANQLSLEEESAEIMVALGNLTSSLLELSKNRPNPTSGTNQSEGDELSNRTSELAFHVQS
KEELVSKIREEMAPRIQTAHNSIAAVQDMYKLTVQAQGSKVMALSSVVTGKEVESKAITL
RRELEDIQREWPQRQAQTKAALKRERLLREKVLEDVRKKVNQTERVLRPALESATLSNAT
AQQAEHTAHTLSKEAKATLTQGKHTRTLSGQLSSSVDTTLQQLAEQENHTTQAQAQLNAE
PVESLASVKANIQAAKLQLEAYSLKLSQLISKIDGSVALERFDHILSETAVRLGVLRGSV
ESPFLNGKIQTLRSAAQDQKSQLTHLEQDLQEIRQERDSLKDIALHLPQTCPQASGIEGH
NT seq 4863 nt   +upstreamnt  +downstreamnt
atggataccccactgaccaccccactcctcctcctctgctccctctcctttgttcacggg
gccatggactcctgctacgatgacgatgagggcgtccctagccgttgcatgcccaagttt
gagaacgcagccttcaaccgcacgatcatggcttccaacgtgtgtggttcaccgccggag
gactactgcatgcagacgggctcgacacgctcctgccaccactgtagcatatcggacaca
ggcctcagccacaacgccagcctgctgacggacttccacacagacgaggaacccacctgg
tggcagagccagtccatgttctacagagtccagcaccctaactccgtcaacctcaccctg
caccttggtaaagcctttgagatcacctacgtgcggctcaagttctacaccagccgaccg
gagagctttgccatctacaagcggacaagtgaggatggaccatggacgccctaccagtac
tacagcgcctcctgtagcaagacctatgggaaaaacgccaagggatatatccgcccgggg
gatgacgagaggatggcagtgtgcaccgatgagttcagtgacatctcccctttgagtggg
ggcaacgtggccttctctaccctggagggacgacccagcgcatacaactttgaccagagc
gccgtgttacaggagtgggtgacagccaccgacctgctgatctctctggataggctcaac
acttttggagacgagttcttcaaggacgccaaggtgctgcgatcctacttctacgccatc
tctgatttctctgtgggagccaggtgtaagtgtaatggtcatggcagtgagtgtgtgttg
gacgagcagggggctctggtgtgtgactgccagcatcacacagctggggtggactgccag
aagtgtcatccgttctatcaggacaggccatgggccagggccaccggagactctgccaac
cagtgtatgaagtgtaactgcagtgggcgagcggatgcgtgtgtgttcgatgcggagcag
taccgtagcacagggagtggggggcgctgtgtggactgtagggaccacactgatggaccg
cactgtgaacgctgcaaagagaaccactaccgacggtcaccacaggacctatgcaggccc
tgcgactgtaacgccataggttctgtgagtctgcagtgtggtgcagaggggatgtgtatg
tgcagacccagtgtgacgggggagaagtgtgacacctgtcaacccggcttccactcgctc
agccctggcggctgcaggtcgtgtgactgtgaacccaggggcagtgttggcatctgctct
acgctggacggtggctgtcactgcaaggaaaacgtggagggacaggcgtgtgacaggtgc
aagccaggctccttcaacctgctggagaacaacccagctggctgcatgtcatgtttctgc
ttcggacactcattggcctgcagatcctccaatcgccatgcagctgtcaacatcacttct
gacttccttgaagacccagatggctggtctggacagttctctgggggacaggagtaccct
ctgctgtggaaggaaggggaggtctacctgctaccactcagtgaggacgacctgggcttc
tacagagctccagagaagttcctggggaaccatctcctgagctacggccagctcctctcc
ctgaccttcacggccgaggctcagtgcctcctccctcacagtgtcactgtgcttctggaa
ggatctggaaccaccctgtcagctgacctttcaccccaacctggacttgtccaccagcca
ggcctcgctccccagcacaccttcactctcagacttcacgaggaggagacaagactgagg
cctttcctgtctgccttcgagttccaatgtcttctcttcaacctcactgcattcaggatc
agcaacgcaggaggacacaactacacgtcccaactctcagaggtaaccctggcctccgct
gccccctcctccagccctgttaccccctctaccccccctgctccctgggttgaggtgtgt
acgtgtcccccgggatttgggggtcagttctgtgagctgtgtgccccagggtacaccaga
gaggtccctaacggaggaccgctgtcaccctgtgtgccctgcacctgccaccagcacgga
ccctgccaccctgagacaggtgtgtgtgagtgtgccgacttcaccacaggaccgaactgc
gagcactgcctgggtggttactatggcaacgcgttgattggcacaaccaacgactgtcga
acttgcccctgcccggaccgcactagctgtgctcaaatgatggagatgggggatgtggtc
tgtaccaactgccctccaggacagaggggaaccaggtgtgagatgtgcgaggacggtttc
cacggtgaccccctgggccggtctgggctggttcggcagtgcgagcggtgcgactgtaac
ggtaacgtggaccccaacgcgctaggcgtgtgtgatcacatgacgggccgctgcattaag
tgtctgggacacacagagggagaccactgtcaacgttgccgacgcggttactatggagat
gccatggaccggacgatggcccggaagtgcaaaccctgcgactgcagtcctgcagggact
tctgggctgttggaggactgtgacccccagacaggaagttgtcagtgccttagtcatgtg
accgggggaaactgtggccagtgttcagtcggcttcttcaatctgcagcctggagtaggc
tgtgagaggtgcaactgtaaccccattggctcgtcttccacggcgtgccaccagatcaca
gggcagtgtgtgtgtcggccgggagtggaggggcggctgtgcagcacctgtcgtatgggc
ttctttgatttctcctcgcgaggctgcagagcctgtaactgcaaccctatgggatccagc
tccatgcagtgccacacaaatggcacctgtccctgccgccacggcttcgtggggtacaag
tgtgaccagtgtgagctcaactacttccacaacagagccacgcaccagtgtgaagaatgc
cccatctgctatgggttggtcaaggagcaggcagggaaactgaaggcacggctgcagaat
ttggagaagctcctggcacgcttcgactgccggagtgactacgggcgccagcatcacgtg
cgtgagtatcacgtgcgccagcatcacgagcgtgggcatcagggggaggacagcctgccc
aatgccctggaggaattcctggctatccaagaggcaaaagaagcctttgtcgaacagttt
gctctcctggagttgtctacacacactctctcagcccagctgcacactgttaccacagct
atgaactgtagcgccagcatggaggaagagcagaaggaagaggagaaggaggaagggtgg
agaacattgtgcaggacccttgctgactctgtgtcagtggttagaagtgcacggacccag
ctgaagcaggcaactctggacctggacaacatggtcattcctttcaaggtgacaactgtg
cccaaccgctggaattctgcagtgaacgaatcagagggacttatgaaaagtcacacagag
atggctggtcgtatagagtctatagcgaccaaggctttcatggcctccaaccagacctac
tctctcctgatggacctactggaggacaattctacagaggaatacatcagcaacctcacg
gagcaaatggcagacatgcagcagatgaaggaaaatttgacggcccaggtgaatgagact
gtagccaatcagctgtctctggaggaggagtctgctgagatcatggttgcccttggtaac
ctcacctcctccctattggagctgtccaaaaataggcccaaccccacatcgggaaccaac
caatcagagggtgatgagctgagcaacaggacatctgagctggcattccatgtccagtct
aaagaagaactggtcagtaagatcagagaggagatggcgcctcgaatacagaccgcccac
aacagcattgctgccgtacaggatatgtacaaactgacagttcaagcccaggggtcaaag
gtcatggccctgtcatcggtggtgacagggaaagaagtggagtcaaaggccattaccctg
cggagagaactggaagacatacagagagagtggcctcaaaggcaggcccagacgaaggct
gctctgaagagggagaggctgctgagggagaaggttctggaagacgtcaggaagaaggtg
aaccagacagagagagtcctgaggcctgccttggagagcgctaccctctccaacgctacc
gcacaacaggcagaacacaccgcacacaccctgtctaaagaggccaaggccaccctaacc
cagggcaagcacacaaggacattgtctggccagctcagctcctctgtagatacaaccctg
cagcagctggctgagcaggagaaccacactacccaggcacaagcccagctcaacgcagag
cctgtagagtctctggccagtgtaaaggcgaacatccaggcagctaagcttcagctggag
gcctactcactcaaactcagccagctcatcagtaaaatagatgggagcgtggcgctggaa
cggtttgaccatatactgagtgagacggcggtgcggttgggtgttctgcgtggcagcgtg
gagagcccgttcctgaatgggaagatccagactctacgatcagccgcccaggaccagaag
agccagctgacccacctggaacaggacctgcaggagatcagacaggagagagacagtctg
aaggacattgccctgcacctgccccagacctgccctcaggcctcggggatagagggacac
tag

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