Coregonus clupeaformis (lake whitefish): 121541504
Help
Entry
121541504 CDS
T08357
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03272
Virion - Hepatitis viruses
cclu04145
Phagosome
cclu04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121541504
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121541504
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
121541504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121541504
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121541504
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
121541504
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121541504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
121541504
NCBI-ProteinID:
XP_041706504
LinkDB
All DBs
Position
27:1013482..1045814
Genome browser
AA seq
507 aa
AA seq
DB search
MNKSKLAIGLFVAGILTVVFGTIIVFVGPIIIDEQIVKNLVIDPKNEMSYTMWKDIPVPF
FMSVYFFNVLNPTEFLAGEKPMVEQRGPYVYRKRIQKQNITFHPNDTVSYLEYRSYFFEP
SMSVGNESDVVTIPNMLVLGAAVMMENMPLGVRLLISTTFKGFKEGPFLTKSVGELMWGY
DSKLVDFLNKWFPGMLPSTGKFGLFSEFNNTNTGLFTIHTGKDDIRLIHKVDSWNGLTKL
TNWKTPQCNMINGTAGQMWPPFMTKESTLPFYSPDACRSLELVYQREGIMKGIPLYRYVA
PKTMFANGSDYAPNEGFCPCRQSGLLNVSSCRSNSPVFISHPHFYNADPVLLDYVQGLQP
TEDEHGLFIDIHPETGVPLNVSIRLQLNLYMKMVSGITETGNISEVVMPMIWFEESGYID
GAILKTFHTNLVILPMVMVYMQYCFIGLGLATILGAVLLHYREKALLKKDLPTVMENHWA
TVRDPVNSSDAHKQMDKCIMNDTAHNL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctaagttagcaatcggactttttgtcgcaggtattctgactgtagtgttt
gggacaattattgtattcgttggaccaatcatcattgacgagcaaatagtaaagaactta
gtaatagaccctaagaatgagatgtcctacaccatgtggaaggacatccctgtccccttc
ttcatgtctgtttacttcttcaacgtcctcaaccccaccgaattcctggcgggagagaaa
cccatggtggagcagagaggaccctatgtatacaggaagcgtattcagaagcagaacatc
acgtttcatcccaacgatacagtgtcatatcttgaatacaggagctacttctttgagccc
agcatgtcagtgggcaatgagtcagatgtggtcaccatccccaacatgctggtgttgggt
gcggcggtgatgatggagaacatgccactcggagtgcgtctgttgatcagcaccaccttt
aaaggttttaaggagggaccattcctcaccaagtctgtaggagagctgatgtggggctac
gacagcaagctggtggacttcctcaataaatggttccctggcatgctgccctccaccggc
aagtttggcctcttctctgagttcaacaacaccaacactggtctgttcaccatccacact
gggaaggatgacatccggctgattcacaaagtggactcatggaacggcctgaccaagttg
accaattggaagactccccagtgtaacatgatcaacggcacagcaggacaaatgtggcct
cctttcatgaccaaagagtccacactgcccttctacagtcctgacgcctgcaggtctttg
gagctggtgtaccagcgtgaggggataatgaaggggattcccctctatcgctacgtggct
cctaagactatgttcgctaacggctcagactacgctcccaatgagggcttctgtccctgc
agacagtctggcctcctcaacgtcagcagctgcagatccaactcgccagtgttcatttcc
cacccccacttctacaatgctgaccctgtgctgctggactacgtacagggacttcagcct
actgaggacgaacacggactattcatagacatccaccctgagactggtgtgcctctgaat
gtgtctatccgtctgcagctcaacctgtacatgaagatggtgtcaggaatcacggaaacg
gggaacatctcagaggtggtgatgcccatgatctggtttgaggagagtggttatatcgac
ggtgccatcctgaaaacgttccacactaacctggtgatattgccaatggtgatggtgtac
atgcagtactgtttcataggccttggcctggccaccatactgggagctgtactgctacac
tacagagagaaggcattgttgaaaaaagatctgcctacagtgatggagaaccattgggca
acggttagagacccagtaaacagctcagatgcccacaaacagatggacaaatgtatcatg
aatgacacagctcataatttgtga
DBGET
integrated database retrieval system
