Coregonus clupeaformis (lake whitefish): 121541506
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Entry
121541506 CDS
T08357
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04210
Apoptosis
cclu04517
IgSF CAM signaling
cclu04530
Tight junction
cclu04540
Gap junction
cclu04814
Motor proteins
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121541506
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121541506
09143 Cell growth and death
04210 Apoptosis
121541506
09144 Cellular community - eukaryotes
04530 Tight junction
121541506
04540 Gap junction
121541506
09142 Cell motility
04814 Motor proteins
121541506
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121541506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121541506
03036 Chromosome and associated proteins [BR:
cclu03036
]
121541506
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121541506
04147 Exosome [BR:
cclu04147
]
121541506
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121541506
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121541506
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121541506
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121541506
Exosomal proteins of other body fluids (saliva and urine)
121541506
Exosomal proteins of colorectal cancer cells
121541506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121541506
NCBI-ProteinID:
XP_045063933
LinkDB
All DBs
Position
27:complement(1184354..1191112)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPNGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatttctatccacgttggtcaggccggtgttcagatcgggaatgcctgc
tgggagctgtactgcttggagcatgggatccagcccaatggtcagatgcccagcgacaaa
accattggcggaggggacgattccttcaacactttcttcagcgagactggagcgggaaaa
cacgtccctcgtgcagtgtttgttgacctcgaaccaactgttgttgatgaggtccgcact
gggacataccgtcagttgttccacccggagcagctcatcaccggtaaggaggatgccgcc
aacaactatgctcgtggccactacactattggcaaggagatcgtggatctggtgctggac
cgagttcgcaagctgtcggaccagtgcactgggcttcagggcttcctgatcttccacagc
tttggtggtggaactggctccggctttgcctctctgctcatggagagactgtctgtggac
tatggcaagaagtccaaactggagtttgccatttaccccgcccctcaggtgtccacagct
gtggtggagccctacaactctatcctgaccacccacaccaccctggaacactcggactgt
gccttcatggtcgacaacgaggccatctatgacatctgccgtcgtaacctggacattgag
cgccccacctatactaacctcaacaggctcattggccagattgtctcctccatcaccgcc
tcactgcgttttgatggagccctcaacgtggacctgactgagttccagaccaaccttgtg
ccatacccccgtatccacttccccctggtcacctacgcacctgtcatctctgctgagaag
gcctaccacgagatgctctctgtggcagagatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgtgaccctcgccatggcaagtacatggcctgctgcatgctgtaccgt
ggggatgtggtgcccaaggacgtcaacgctgccatcgccaccatcaagaccaaacgcacc
atccagtttgtcgactggtgccccaccggcttcaaggtaggcatcaactaccagccaccc
acagtggtgccaggtggagatcttgccaaggtccaaagagccgtgtgcatgttgagcaac
accacagccatcgctgaggcctgggctcggcttgaccacaagtttgacctgatgtatgcc
aagcgtgcctttgtgcactggtatgtgggagagggtatggaggagggtgagttctccgag
gccagagaagatctggctgccctggagaaggactacgaggaagtgggagtggattcagtg
gagggagaggctgaggaaggagaggagtactga
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