Coregonus clupeaformis (lake whitefish): 121541524
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Entry
121541524 CDS
T08357
Symbol
mef2ca
Name
(RefSeq) myocyte enhancer factor 2ca isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121541524 (mef2ca)
04371 Apelin signaling pathway
121541524 (mef2ca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121541524 (mef2ca)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
121541524 (mef2ca)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
121541524
NCBI-ProteinID:
XP_041706528
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Position
27:1764273..1792704
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AA seq
478 aa
AA seq
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MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGFDSPDIEADDSAGQSPESEDKYRKI
NDDIDLMISRQRLCQALPPSNYDMIGSIQGQNNSGLLYSQPGAGGSLGNHNLLPLSHTHT
GLQRNSMSPGLQHTHRPLSAGNAGGMMGSELSNTVSNAGNGSYGNHRNSPGLLSPGCVAK
GMQAKTPPQMASMTLSGNRKPDLRTLLPPGNKNNVPSVNQRINHSQSAQSLATPVVSITT
PTLPGQVIGGYPSALSTSYGTEYSLGDLSSLSGFGGNGSGSLHLGSVTGWQQQQLQNMQH
SALGHMGNLCQNSNLNLQNAHQNLHIKSEPASPPRDRGIGFVSGGMGAVSQGYPTNLGPA
EAGRSPGNSLSSCGSSYDGSDREDHRGNDNFLLRPMSNQEERHSPSVKRMRLSEGWAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagatccagatagcacggattatggatgaacgcaacagacaggtgacg
ttcaccaagcggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgcgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtacgccagcact
gacatggacaaggtcctgctcaaatacacagagtacaatgaaccacacgagagcaggact
aactctgacatcgtggagactctgcgaaagaagggtctaaatggctttgacagtcccgac
atcgaggcagacgactctgctggtcagagccctgagtcagaggacaaataccgcaagatc
aacgacgacatcgacctcatgatcagcagacagagactctgtcaggctctccccccctct
aactatgacatgattggctccatccagggccaaaataacagcggactactctactctcaa
cctggggcgggggggtccttaggaaaccacaatctgctgcccctctcacacacacacact
ggcctgcagaggaacagcatgtcgcctggactccaacacacacaccgacccctcagcgct
ggaaatgcaggagggatgatgggttcagagctgtctaacacggtctctaacgctggtaat
ggtagctatggtaaccaccgcaactctccggggcttctgtctcctggatgcgtggccaaa
ggcatgcaggccaagactccaccccagatggcctccatgaccctgagtggtaaccgcaag
ccagacctccgtacgctgctgccccctggcaacaaaaacaacgtgccctccgttaaccag
agaataaaccactcccagtcagcccagtctttggctactcctgtggtctccataacaaca
cctactctgcccgggcaggttataggagggtacccctctgccctctccacctcctatggc
acagagtactctctgggtgacctgagctctctgtcagggtttggagggaacggctctgga
tcacttcacctgggatcagtaacaggctggcagcaacaacagctacagaacatgcagcac
tcagcactaggacacatgggaaacctttgtcagaactccaacctcaacctccagaatgcc
catcagaaccttcacatcaagtcagagcccgcctccccgcccagagatcgaggcatcgga
tttgtcagcggagggatgggggccgtgtcccagggctacccaacaaatctgggcccagca
gaagcagggcggtctcctggcaacagcctatccagctgtgggagctcatacgacggcagc
gaccgcgaggatcaccgcggaaatgacaacttcctgctgcgcccgatgtccaatcaggag
gagcgccatagcccgtccgtcaaacgcatgcgcctatcagaaggctgggctacatga
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