KEGG   Coregonus clupeaformis (lake whitefish): 121541536
Entry
121541536         CDS       T08357                                 
Symbol
zgc:100918
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137  Mitophagy - animal
cclu04140  Autophagy - animal
cclu04144  Endocytosis
cclu04145  Phagosome
cclu04148  Efferocytosis
cclu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121541536 (zgc:100918)
   04145 Phagosome
    121541536 (zgc:100918)
   04140 Autophagy - animal
    121541536 (zgc:100918)
   04137 Mitophagy - animal
    121541536 (zgc:100918)
   04148 Efferocytosis
    121541536 (zgc:100918)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121541536 (zgc:100918)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121541536 (zgc:100918)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121541536 (zgc:100918)
   04031 GTP-binding proteins [BR:cclu04031]
    121541536 (zgc:100918)
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    121541536 (zgc:100918)
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121541536 (zgc:100918)
  Exosomal proteins of other body fluids (saliva and urine)
   121541536 (zgc:100918)
  Exosomal proteins of colorectal cancer cells
   121541536 (zgc:100918)
  Exosomal proteins of bladder cancer cells
   121541536 (zgc:100918)
GTP-binding proteins [BR:cclu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    121541536 (zgc:100918)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW ATP_bind_1 PduV-EutP nSTAND3 Septin AAA_16 NTPase_1 AAA_22 AAA_7 DUF5992 AAA_24 G-alpha AAA_5 SRPRB ATPase_2 NB-ARC NACHT ABC_tran AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 121541536
NCBI-ProteinID: XP_041706544
LinkDB
Position
27:2229228..2240278
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPEQIKLRDDRPSSSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggttggg
aagacttctctgatgaaccagtatgtaaataagaagttcagcaaccagtacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggacactgcagggcaggagcggttccagtctctgggcgtggcgttctaccgtggc
gctgactgctgcgtgctcgtctatgatgtcacggcgcccaacaccttcaagacgctggac
agctggagggacgagttcctgatccaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaagcgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgctaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaacagatcaaactgagagacgaccggccctcctcctccagc
gacggctgctcctgctga

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