Coregonus clupeaformis (lake whitefish): 121541536
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Entry
121541536 CDS
T08357
Symbol
zgc:100918
Name
(RefSeq) ras-related protein rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04140
Autophagy - animal
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04148
Efferocytosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121541536 (zgc:100918)
04145 Phagosome
121541536 (zgc:100918)
04140 Autophagy - animal
121541536 (zgc:100918)
04137 Mitophagy - animal
121541536 (zgc:100918)
04148 Efferocytosis
121541536 (zgc:100918)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121541536 (zgc:100918)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121541536 (zgc:100918)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121541536 (zgc:100918)
04031 GTP-binding proteins [BR:
cclu04031
]
121541536 (zgc:100918)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
121541536 (zgc:100918)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121541536 (zgc:100918)
Exosomal proteins of other body fluids (saliva and urine)
121541536 (zgc:100918)
Exosomal proteins of colorectal cancer cells
121541536 (zgc:100918)
Exosomal proteins of bladder cancer cells
121541536 (zgc:100918)
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
121541536 (zgc:100918)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
cobW
ATP_bind_1
PduV-EutP
nSTAND3
Septin
AAA_16
NTPase_1
AAA_22
AAA_7
DUF5992
AAA_24
G-alpha
AAA_5
SRPRB
ATPase_2
NB-ARC
NACHT
ABC_tran
AAA_14
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
121541536
NCBI-ProteinID:
XP_041706544
LinkDB
All DBs
Position
27:2229228..2240278
Genome browser
AA seq
205 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPEQIKLRDDRPSSSSDGCSC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggttggg
aagacttctctgatgaaccagtatgtaaataagaagttcagcaaccagtacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggacactgcagggcaggagcggttccagtctctgggcgtggcgttctaccgtggc
gctgactgctgcgtgctcgtctatgatgtcacggcgcccaacaccttcaagacgctggac
agctggagggacgagttcctgatccaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaagcgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgctaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaacagatcaaactgagagacgaccggccctcctcctccagc
gacggctgctcctgctga
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integrated database retrieval system