Coregonus clupeaformis (lake whitefish): 121541558
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Entry
121541558 CDS
T08357
Name
(RefSeq) LHFPL tetraspan subfamily member 2a protein
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
121541558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121541558
03037 Cilium and associated proteins [BR:
cclu03037
]
121541558
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121541558
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121541558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
DUF1494
Claudin_2
Motif
Other DBs
NCBI-GeneID:
121541558
NCBI-ProteinID:
XP_041706575
LinkDB
All DBs
Position
27:16144056..16217065
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AA seq
265 aa
AA seq
DB search
MTFHRSWYQPHRTQLNIIVPSERNRQHQEHFRTTANVIITMCHVIVTCRSMLWTLLSIVA
AFGELIAFMSTDWLVGFPRTPDAVFGPHGATAAGEAYRPTLGIYGRCIKLPHLQRGVLCG
PYAVHFGEIASGFWQAASIFLAAGILLLCAVAFISVFTMCFQSIMKKSIFNVCGLLQAIA
GLFLILGLMLYPAGWGSDKVQLYCGQDAAPYRSGLCTMGWAFYTAMGGTVLTFVCAVFSA
QAEIATSSDKVQEEIEEGKSLICLL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacattccaccgctcctggtatcaaccccatcgaactcaactgaacataattgttcct
tcagagaggaacagacaacaccaggaacacttcagaaccactgcaaacgtcatcatcacc
atgtgtcacgtgatcgtaacctgtcgctccatgctgtggactctactcagcatcgtggcc
gccttcggcgagctcatcgcctttatgagcaccgattggctggtgggcttcccccggaca
ccggacgccgtctttggccctcacggtgccactgcagccggcgaggcctaccggcccacc
ctgggcatctacggccgctgcatcaagctgccccacctgcagcgcggcgtgctgtgcggg
ccgtacgccgtgcactttggggagattgccagcgggttctggcaggcggcgtccatcttt
ctggctgcggggatcctgctgctgtgtgccgtggccttcatctccgtcttcaccatgtgc
ttccagagcatcatgaagaagagcatcttcaacgtgtgtggactgctgcaggccatcgca
ggtctgtttctgatcctgggtctgatgctataccctgcaggctggggttcagacaaggtg
cagctgtactgtggtcaggacgcggctccctaccggtcggggctgtgcaccatgggctgg
gccttctacacagccatggggggcaccgtgctcaccttcgtctgcgctgtgttctccgcc
caggccgagatcgccacgtcctcagacaaggtgcaggaggagatcgaggagggcaagagc
cttatctgcctgctctga
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