Coregonus clupeaformis (lake whitefish): 121541561
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Entry
121541561 CDS
T08357
Name
(RefSeq) AP-3 complex subunit beta-1
KO
K12397
AP-3 complex subunit beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121541561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121541561
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Others
AP-3 complex
121541561
Endosome - Golgi transport
121541561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
SEEEED
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
121541561
NCBI-ProteinID:
XP_041706585
LinkDB
All DBs
Position
27:16272388..16357412
Genome browser
AA seq
1104 aa
AA seq
DB search
MLNMSTNNLSYNDQGGSDSAVEVGQETTPTTNAGAGFGLFSTNFKKNDDLKEMLESNKDS
LKLEAMKRIIALIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQQDLALLSI
STFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTSAHAIQKL
YSLDPDQKEHLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVE
EWGQVVIISMLTRYARTQFTSPWKEDGLFDENSERAFYESDEGKTENEKEAKSYMMDPDH
RLLLRNTKPLLQSRNTAVVMSVAQLYWHLAPKHEISIVTKSLVRLLRSHREVQYIVLQNI
ATMSIQRKGMFEPYMKSFYVRSTDATHIKSLKLEILTNLANEANISTILREFQTYVKSQD
KQFAAGTIQAIGRCATNISEVTDTCLQGLVLLLSNRDETVVAESVVVIKKLLQTQPTQHS
DIIKHMAKLFDNITVPMARASILWLIGEYCERVPKIAPDVLRKMAKTFTSEEDIVKLQTV
NLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALSKYARRI
LLAPKPAPVLESAYKDRDRYQLGTLSHTINTKASGYLELSDWPAVAPDQSVRNVEVIEPV
KEWTPSLGKSKLSKSSDDKFYSDSGEEEEKEKCSGSSSSDDSSSSSSSEESGSEAESDEE
KSSSQSSEESNKSSSQSENSSSESDSEQKKKNATKKPPQKKTVKPTAKDSDSDENGNVAK
EASSSSAEESSSGSESGSDADSDSGTEHKKKTKSKAKPKMEVKSKKVVSLLDLDDFTPTP
VTQPKSYVLSPSLLGDLEGLSLANVSSTMQVSGPAFVPEKSHDLLHRMTGKGLSAQYQFP
RQPCLYQPTMVSVQISLTNTSDHPLEQIHIGDRSPTGLNIYCFNTIECLQPEASVTVSLG
IDFNDSTQAANFQLCTKEDQFSVSIQPAVGELFLPITMTEQDFRKEQGKLLGMNESSATI
TMAAENTTSQPISRQVATVANLGVVPSGQDNLHRFAGKTASSGAVVLVTVELKESSTALI
TINTEKSVMGPMLLRDLKQALSQA
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacatgtcgacgaacaacttgtcgtataacgaccaaggaggatcggattcagcg
gtggaggttggtcaggagactaccccgaccaccaatgctggagctggatttggcctgttc
agtaccaactttaaaaagaatgatgaccttaaagagatgctggagagcaataaggactca
ctcaaactggaggccatgaagaggatcattgcgctgatcgccaaggggaagaatgcttcc
gagctgttcccagcagtggtgaagaacgtggccagtaagaatatagagctgaagaagttg
gtgtatgtgtacctggtgaggtatgctgaggagcagcaggacctggctctactgtccatc
agcacctttcagagggccctcaaggaccctaaccagctgatcagagccagtgctctgagg
gttctgtccagcatcagagtccccatcatcgttcccatcatgatgctggccatcaaggag
gctgcctccgacatgtccccttacgtcaggaaaacatccgctcacgccatccagaaactc
tacagcctggatccggatcagaaggagcacctgatagaagtaattgagaaactgctgaag
gacaaaagcacactggtagcgggcagcgtggtgatggcctttgaggaagtgtgtccggac
cgtattgacctgatccataagaactaccgtaaactctgtaatctactggtggatgtggag
gagtggggtcaggtggtcatcatctccatgttgacacgctacgccaggacacagttcacc
agcccctggaaagaggacggtctgtttgatgagaacagtgagagggcgttctatgagtct
gatgaggggaagacagaaaatgagaaggaggccaagtcctacatgatggaccccgaccac
agactgctcctcaggaacaccaagcctctactacagagtagaaacactgccgtggtgatg
tcagtagcccagctatactggcacctggctcctaaacacgagatcagcatcgtcaccaag
tcactggtcagactgctccgaagccacagagaggtgcagtacattgtgttacagaacata
gccaccatgtctatccagaggaagggcatgtttgaaccttacatgaagagtttctatgtg
agatccacagatgccactcacatcaagtcactcaagctggagatcttgaccaacctggcc
aacgaagccaacatctcaaccatccttagagagttccagacttatgtaaagagccaggat
aagcagtttgctgccggtaccatccaggccatcggcagatgtgccaccaacatctctgag
gtgacagacacctgcctccaagggctggtgctgctgctctccaaccgagatgagacggtg
gtggctgagagcgtggtggtgatcaagaagcttctccagacccagcccacccagcacagt
gacatcatcaaacacatggccaaactcttcgacaacatcactgtgccgatggcgcgggcc
agcatcctgtggctgataggagagtactgtgagagggttcctaagatcgcccctgacgtc
ctccgcaagatggccaagaccttcacctccgaggaggacatcgtcaaactgcagactgtc
aacctggctgccaaactttacctcaccaactctaaacagaccaagttgttgacccagtac
attctgaacctggggaagtatgaccagaactatgacatcagagaccgcacgcgtttcatc
cgccagctcatcgtgcccaatgagaagagcggcgcactcagcaagtatgcccgccgcatc
ctgttggcgcccaaaccagcgcccgtcctcgagtccgcctacaaagaccgtgatcgttac
cagttgggaaccctgtcccacaccatcaacaccaaagccagcggctacctagagctctct
gattggcctgccgtggctcctgaccaatcggtgaggaacgtggaggtgatcgagccggtg
aaggagtggactccttcgcttggaaagtccaagctgtccaagtcatcagatgataagttc
tactctgactctggagaggaggaggagaaggaaaagtgctcagggagcagtagcagtgat
gatagcagcagcagcagtagtagtgaagagtcaggcagcgaggcagagagcgatgaggaa
aagagcagtagtcagagcagtgaagagtcgaacaagtcctccagccaatcagagaacagt
tccagtgagtctgactctgaacagaagaagaagaatgcaactaagaaaccaccacagaag
aagacagtcaaaccaacggccaaagacagtgattcagatgagaatgggaacgttgctaaa
gaagccagcagttcgtctgcagaagagagctcttctggttccgaatctgggtccgacgca
gactctgactcaggcaccgaacacaagaagaaaaccaaatctaaagccaaacccaagatg
gaggtgaagtcaaagaaggtggtgtcccttttggatttggatgacttcactcctacacca
gtgacccagcccaagtcgtatgtcctctcccccagcctgcttggagacctggaaggcctg
tctctcgccaacgtctcctccaccatgcaggtgagcggtccggcgtttgtcccagagaag
agccatgacctgctgcatcgtatgacaggtaaaggtctgtcagcccagtaccagttcccc
agacagccttgtctctaccagccaaccatggtctcagtccagatcagcctgaccaacacc
tcagaccaccctctggaacagatccacatcggagacaggagccccacaggactcaacata
tactgcttcaatactatagagtgtctgcagccagaggcctcggtgactgtgtctttgggc
atcgacttcaacgactcaacacaagcagccaacttccagctgtgtacgaaggaggaccag
ttcagtgtgtccatccagcctgccgtaggagaactcttcctacccatcacgatgaccgaa
caggacttccgcaaggagcaaggtaaactgctgggcatgaacgagagctcggcaaccatc
accatggcagcagagaacacgaccagccaaccaatcagcagacaggtggcaaccgtggcc
aacctgggagtggttccatccggtcaagacaacctccacaggtttgctggtaagacggcc
agtagtggagctgtggtgctggtgacggtggagctgaaggagtcgtctacagccctgatc
accatcaacacagagaagagtgtcatgggccccatgctgctccgagacctgaaacaggcc
ctgtcccaggcctag
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