Coregonus clupeaformis (lake whitefish): 121541577
Help
Entry
121541577 CDS
T08357
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121541577
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121541577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_14
V-set
LRRNT
LRR_9
LRR_Zer-1
Big_6
LRR_6
Motif
Other DBs
NCBI-GeneID:
121541577
NCBI-ProteinID:
XP_041706619
LinkDB
All DBs
Position
3:complement(17928209..18275976)
Genome browser
AA seq
663 aa
AA seq
DB search
MAERMIVSQSATPLLWRELHQGGLSSTNTALPVPAPAPASSDLRESRDRMVDCMSKVMLH
TALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPGIPDGIPIETRILD
LSKNKLQAINPDEFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSLKSNRIKLIPLG
VFTGLSNLTRLDVSDNKIVILLDYMFQDLHNLKFLDVGDNDLVYISHRAFSGLLSLQTLT
LERCNLTVVPTEALSHLHNLVSLHLRYLSISTLHAYSFKKLFRLRNLEIDSWTSLDSVPA
NTLHSLNLTTLFITNTNLSTFPYQALKHLHYLTHLNLSFNCIRHIEGGMLFELVRLRELR
LVGAQLSTIEPYAFQGLRWLKVLNVSHNHLDTLEKGVFQAPEALEVLLIDDNPLVCDCRL
MWILQKRHSIFFGESQPECSTPEGIRGRPFREFKETLLSYYVTCTKPKIRENKTQTIAVD
EGQPAKLHCSAEGIPRPVVSWLSPRRRLLTNKSHGRVTVHNNGTLEIKVAEVQDGGVYLC
MATNTAGNDSLMASLAVKSLGSLYANRTQYYTDPSNATTNGTSNVTYGLDLKTILVSTAM
GCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSVDGGAEGQAGPHRFNM
KMI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaggatgattgtttctcaaagtgcaactccactcctttggcgggagcttcat
cagggtggactgagctctaccaacactgctctcccagttcccgccccagcccctgcatcc
agcgacttgagggagagccgtgacagaatggtcgactgtatgagcaaagtcatgctgcac
acagccctctcatgctggcaaccgttcctgggactggctctcgtggccgtcttcgtgggt
tccgccctgggatgtcccgcccgctgcgactgctcagcccagagcaagtcggtcctgtgc
caccgcaaacgcctaccgggcatccccgacggcatccccatcgagaccaggatcctggac
ctgagcaagaacaagctgcaggccatcaacccggacgaatttgccccctaccctggacta
gaggatttggacctcagtgggaacattatcagctatgtggagccgggggcattcaaccct
ctgtacagcatgcactcactcagtctcaaaagcaaccgcatcaagcttattcccctgggc
gtcttcacaggcttgtccaacctcacacggctggatgtcagcgacaacaagatcgtcatc
ctgctggactacatgttccaggacttgcacaacctgaagttcctggatgtgggtgacaat
gacctggtgtacatctcgcaccgggcgttcagtggactgctgagcctacagacactaacc
ctggagagatgcaacctgacggtggtgcccactgaggccctgtcccatctgcacaacctg
gtcagtcttcacctgcgatacctcagcatcagcaccttgcacgcctactccttcaaaaag
cttttccggctgcgcaacctggagattgacagctggacctcactggacagtgtgccggcc
aacacgctgcacagcctcaacctgactacactatttatcaccaacaccaacctgtcaacc
ttcccataccaggccctaaagcacctgcactacctgacacacctcaacctctccttcaac
tgcatcagacacatcgagggggggatgctgtttgagttggtgcgcctgagggaactgcgt
ctggttggggcccagttgtcgaccattgaaccgtacgcatttcagggcctccggtggctc
aaagtcctcaacgtctcccacaaccatttggacaccctggagaagggtgtcttccaagcc
cctgaggctctggaggtcctcttgatcgatgacaaccccctggtgtgcgactgccgtctc
atgtggatcctgcagaaaaggcactccatcttctttggcgaatcgcagccagagtgcagc
acccccgagggcatccgcggcagacctttcagggagttcaaggagaccctgctctcctac
tacgtgacatgcaccaagccaaaaatccgggagaacaagacacagacgatagccgtggac
gagggccagccagcaaaactacactgtagtgcagaagggatccccaggccggtggtgtca
tggctgtccccacgtcggcgcctcctcaccaacaagagccatggcagagtcacggtccac
aacaatgggacgctggagatcaaggtggccgaggtgcaggacggcggcgtatacctttgc
atggcaaccaacacagcaggtaacgactcattgatggcctccctagcagtgaaaagcctg
gggtcgctctacgcaaacaggacccagtactacacagatcccagcaatgccactaccaat
gggactagcaacgtgacctacggcttggacctaaagactatcttagtgtcgacagcaatg
ggatgtttcacattcctgggggtggtcttgttctgcttcctgctcctgttcgtttggagc
cggggcaaaggaaagcataaaaacaatatagatattgaatatgtccctcggtccaagtct
aacggcacctctgtagatggaggggcagagggacaagctggacctcatcgctttaacatg
aaaatgatctaa
DBGET
integrated database retrieval system
