Coregonus clupeaformis (lake whitefish): 121541580 Help Entry 121541580         CDS       T08357                                  Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04510   Focal adhesion cclu04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:cclu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     121541580  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     121541580  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121541580 Glycosaminoglycan binding proteins [BR:cclu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    121541580 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN EGF_Teneurin Fibrinogen_C EGF_Tenascin EGF_2 Ig_DSCAM-DSCAML_C Fn3_Dep-1_2nd EGF Pur_ac_phosph_N Fn3_Dep-1_1st hEGF FN3_Tor_3rd fn3_2 NDNF_C Motif Other DBs NCBI-GeneID:  121541580 NCBI-ProteinID:  XP_041706621 LinkDB All DBs Position 27:17470795..17546420 Genome browser AA seq 1632 aa AA seqDB search MGTKSFLGCVFLTLLLNLCQAGLVRKILRHKRTTLTTPGGDNVTLTSADQPVVFNHVYNI NVPTGSLCSVDLDAPGNTSLEPQDAAQPSGLRTTEHTLDGQNQIVFTHRINIPQQECACT DGLPDLKDLLGRLEMLEGEVSTLRDQCTTGDAGCCSAQPVTGEVGTKPYCNGRGNYSADT CGCICEPGWKGPNCTESECPNNCQDQGRCVDGKCVCFEGFGGDDCSLKVCKVDCGGNGQC IGGVCVCAEGYNGEDCSQTDCLNNCLSHGKCVDGECVCEEPWTGYDCSELICPNDCYDRG RCVNGTCYCEEGFTGEDCGEKTCPSDCLGNGFCVDGQCVCSAGYTGEDCSELTCPGDCND RGVCFNGMCICNAGYQGEDCSQLACPNNCHNRGQCVNGQCICNVGYQGEDCSELSCPNNC LNRGRCVNGQCVCDEGFGGEDCSIKTCPSDCYGSGDCVDGRCVCYAGFTGEDCSELSCPN NCLSRGRCVDGQCVCDEGFTGEDCTEKHCPNDCLGRGYCVDGKCVCQEGYAGVDCSELTC PDNCNNRGHCVNGKCMCEVGYVGDNCGELSCLNNCQDKGRCVNGHCLCDEGYTGEDCSEV SPPKDLTVTEVTTDTVDLTWNNEMLVTEYLIAYVPTSPGGLYQEFRVPGDKTAATVSELE PGIEYLINVYAILSNKKSIPISARVATHLPEPDGLKFKSVRDTSVEVLWDQLDIPFDAWE LYVRNTKEENGKILTTLPSSQTMYKQSGLGPGQEYEVSVGVIKNNTRGPQSTKIITTRID GPRQVEVRDVTDCSGLVTWFHPVAQVDGVTVSYSPSSDPTERTSVDLSTSDKQYSIDSLS PDTEYQVSLVSRRGDTTSEPVSEIFTTDLDAPKDLQPLGQTDNSVTLEWRNSRADVDSYR VKYSPISGGSHGEEVFPRGSGDNTQATITGMKPGTEYGIGVTAVKNERESLPATTNAATD LDGPKDLEVSESTETSMTLVWRRPRSKITVYRLVYISRDGRREEVEVPGTATTYILTNLT PGMLYTITLVAERGSKKSTPVTLSASTEELRPVVANLTVSDVTWDSFNVSWTPEDGEFES FVIEVTNLQEGLESENLTLSGDAFSLSISGLSPNTSYRIGLYGLHQGSFQEPVYTEVTTG LGAPRGIRFSEVTESSAIVHWTMPHDRVDSYRIIYVPLQGGSPMTVLVDGTETQALLPNM LPGVTYQVNIFAMKGLEESDPGTDTITTALDRPQGLSAVNVTDTTAQLLWQPTRATVDGY VITYSADSVSPVMEHVSGNTVEFEMGSLVPATHYTVGVYAMREAQKSGTTTTEFTTDVDS PRDLVASNVQTDSATLTWKPPRAAITGYVLTFTSSDSTVREVVLSPTSTSYSMTQLSGTT EYNVRLQAIAGAQRSHHATTVFTTTGVLYRYPKDCSQALLNGDTTSGIYTIYLGGDESQP IQVYCDMTTDGGGWMVFLRRQSGKLEFFRNWKNYTGGFGDINAEFWFGLANLHKMTTAGQ YELRVDLRDNGESAYAQYDKFTIAEPRSRYKMHIGGFSGTAGDSMTYHQGRPFSTYDNDN DIAVTNCALSYKGAFWYKNCHRVNLMGRYGDDSHSKGINWFHWKGHEHSIQFAEMKIRPV NFRNVESRRKRS NT seq 4899 nt NT seq  +upstreamnt  +downstreamnt atgggtactaaaagctttctagggtgcgtcttcctgactctccttctcaacctctgccaa gctgggctggtgagaaaaatacttaggcataaacggacgaccctgacaacccccggcgga gacaatgtgaccctgaccagcgctgaccaaccagtggtcttcaaccacgtctacaacatc aatgtccccaccggctccttgtgctcagtggacctggatgccccaggaaacaccagcctt gagccccaggacgcagctcagccttcaggcctccgcaccaccgaacataccctggatggg cagaaccagatagttttcactcaccgcattaacattcctcagcaggagtgtgcatgcact gatgggctcccggatctgaaggacctcctgggcaggttggagatgctggagggagaggtg tccacgctgagagatcaatgcactactggagacgctggctgctgcagcgctcagccagtc acaggtgaggtggggaccaagccttactgcaatggccgtggaaactacagtgctgacacc tgtggttgcatttgcgagcctggctggaagggacccaactgcaccgagtctgaatgcccc aacaactgccaggaccaaggtcgctgtgtggacgggaagtgcgtctgctttgagggcttt ggcggggatgactgttcactcaaggtttgcaaagtggactgtggtgggaacggacaatgc attggcggggtctgtgtctgtgccgagggttacaatggagaggactgttctcagacagac tgcctgaacaactgcctaagccatggaaagtgtgtggacggggagtgtgtgtgtgaagag ccctggacgggctacgactgctccgaactcatctgccccaatgactgctacgaccgcggc cgctgcgtcaacggaacctgctactgcgaagaaggattcaccggggaggactgtggggag aaaacctgcccaagcgactgcctgggaaatggtttctgtgtggacggccagtgtgtctgc agcgctggctatactggagaggactgctccgagctcacttgccccggtgactgcaatgat agaggtgtctgcttcaacggcatgtgtatctgcaatgctggctaccaaggagaggattgt agccagctggcttgccccaacaactgccacaacaggggacagtgtgtcaacggacagtgc atctgcaacgtaggctaccagggagaggactgctctgagctctcctgccccaacaactgc ctcaaccggggccgctgtgtcaatggacagtgtgtgtgcgatgaagggttcggtggtgag gactgcagcatcaagacctgcccctcggactgctacggcagtggagactgtgtggatggc cggtgtgtctgctatgctggcttcaccggtgaggactgcagcgagctgagctgccccaac aactgcctgagccgcggacgctgcgttgacgggcagtgcgtctgcgacgagggcttcaca ggggaagactgcactgagaagcactgtcccaatgactgcctgggccggggatactgcgtg gatggcaaatgtgtctgccaggagggctatgcgggtgttgactgctctgaactcacctgc cctgataactgcaacaacagggggcactgtgttaatgggaagtgcatgtgtgaggtggga tacgtgggagacaactgtggagagctgagctgcctcaacaactgccaggacaagggccgc tgtgtgaatggacattgtctctgtgatgagggatacactggagaagactgctcagaagtt tcccctccaaaggacctgactgtaacagaggtcaccaccgatacagtggatctgacctgg aacaatgagatgctggtgacagagtatctgattgcttatgtgcccactagtcctgggggt ctgtaccaggagttcagagtgcccggagacaagactgctgccacagtcagcgagctggaa cccggcatcgagtacctgatcaacgtctatgccatcctcagcaacaagaagagcatccca atcagcgccagggtggccacacatctaccggagccagatggcttgaagttcaaatcggtg agggacacctcagtagaggtgttgtgggatcagctggacattccctttgatgcctgggag ctctatgtccgcaacacgaaagaggagaatgggaagatcctgacaacccttccatcctcc cagactatgtataagcagtcagggctcggtcctggtcaggagtacgaggtctcagtgggc gtcatcaagaacaataccagaggacctcagtctactaaaatcatcactaccaggattgat gggcccagacaggtagaggttcgtgacgtgacagactgctcgggcttagtcacctggttc catcccgtggcccaggtggacggtgtcaccgtgtcctacagccccagctctgaccccaca gagaggaccagcgtggacctgtccacctcagacaaacagtacagcatcgacagtctcagc ccagacactgagtaccaggtgtccctggtctccaggaggggagacaccaccagcgagcca gtctctgagatattcaccacagacctggacgcccccaaggacctgcagcccctgggccag acagacaacagcgtcacactggagtggagaaacagccgggcagatgttgacagctacagg gtgaagtacagccccatctctgggggttcccatggcgaagaggtgttcccccgtgggtca ggagacaacactcaggccaccatcactggaatgaaaccgggtacagaatacgggattggt gtgaccgccgtgaagaacgagagggagagcctgcctgccactacaaatgcagccaccgat ctcgatgggcccaaggacttggaagtgagcgagtccacagagaccagcatgaccctggtg tggaggagacccagatccaagatcactgtctacaggctggtgtacatctccagggacggc cggagggaggaggtggaggtccctggaacagccaccacctacatcctgaccaacctgacc cctggcatgctgtacaccattaccctggtcgctgagaggggctcaaagaagagcacaccc gtaaccctgtccgcatctacagaggagctgaggcctgtggtggccaacctcacagtctct gacgtgacatgggacagcttcaatgtgtcctggactcccgaggacggagagtttgagagc tttgtcattgaggtgacaaacttacaggaaggtttagagagcgagaacctcaccttgtct ggtgatgccttcagcctgagcatttctggcctgagtcctaacacttcatataggattggc ctgtacgggctccaccagggctccttccaggagccggtgtataccgaagtcactacaggc ctgggtgctccaaggggcattcgcttctctgaggtgaccgagtcctcggccatagtccac tggaccatgcctcatgacagagtggacagctaccgcatcatctatgtgcctctccaagga ggtagcccaatgacagtgcttgtggatgggactgagacccaggccttgctgcctaacatg ttgccaggggtgacctaccaggtgaacatattcgctatgaagggcctggaggagagtgac ccagggacagacaccatcaccacagctctggacaggcctcagggtctttctgctgtcaac gtcactgacacaaccgcccagctgctatggcaacccactcgggccactgtcgatggctac gtcatcacctacagtgcagattcagtgtccccagtgatggagcatgtttctgggaacaca gtggagtttgagatgggctctctggtccctgccacccactacacagttggggtatacgcc atgagggaggcacagaagagtggcaccaccaccaccgaattcaccacagatgtggattct cctcgtgacctggtggccagtaatgtccagacagacagtgccactctcacttggaagccc ccgcgtgccgccatcaccggatacgtcctcaccttcacctcatctgacagcacagtccgg gaagtggtcctgagccctacatccacatcatacagcatgactcagctgagtggcactacc gagtacaacgtcaggctacaggccatcgctggagcccagcggagccaccacgccaccacc gtcttcaccaccaccggagtgttgtacagataccctaaggactgctcgcaggctctgctg aatggagacactacctctggcatctacaccatctacctgggaggagacgagagccagccc atccaggtctactgtgacatgaccactgatggaggcggatggatggtgttcctgaggcgc cagagtggaaagctggagttctttaggaactggaagaattacactggtggctttggggat attaatgctgaattctggtttggtctggccaacctccacaagatgacaacagcaggccag tacgagctgcgtgtggacctgagggacaacggggagtcggcctatgctcagtatgacaag ttcaccatcgcagaaccccgcagccgctacaagatgcacataggagggttcagcggcaca gcaggtgactctatgacttatcatcagggccggcccttctccacgtatgacaatgacaat gacatcgccgtcaccaactgtgccctgtcctataagggtgccttctggtacaagaactgc catcgtgtcaaccttatggggagatatggtgacgatagtcacagcaagggtatcaactgg ttccattggaagggacacgagcattcaatacagttcgccgaaatgaagattagacccgtc aacttcagaaacgttgaaagtcgaaggaaaagatcatag

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