Coregonus clupeaformis (lake whitefish): 121541600
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Entry
121541600 CDS
T08357
Name
(RefSeq) syntaxin-binding protein 1 isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121541600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121541600
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121541600
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121541600
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121541600
BRITE hierarchy
Motif
Pfam:
Sec1
YlbD_coat
FRB_dom
Motif
Other DBs
NCBI-GeneID:
121541600
NCBI-ProteinID:
XP_041706673
LinkDB
All DBs
Position
27:complement(20233249..20284462)
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AA seq
605 aa
AA seq
DB search
MAPIGLKAVVGEKIMNDVIKKVKKKGEWKALIVDQLSMRMLSSCCKMTDIMSEGITIVED
INKRREPLPTLEAIYLITPTDKSVQTLIGDFKDPHSAKYKAAHVFFTDSCPDPLFNEVVK
SRASKSIKTLTEINIAFLPYESQVYSLDNPDAFQSFYSPHKTQLKNPVMERLADQLATLC
ATLKEYPAVRYRGEYKDNATLAQLLQDKLDAYKADDPTMGEGPDKARSQLIILDRAFDPV
SPVLHELTFQAMGYDLLPIENDVYRYDSPGMGDTSQKEVLLHEDDDLWVGLRHKHIAEVS
TEVTRQLKDFSASKRMNTAGEKTTMRDLSQMLKKMPQYQKELSKYSTHLQLAEDCMKHYQ
GTVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDANVTTHDKIRIILLYIFLKNGIT
EENLNKLIQHAQIPPEDSEIITNMAHLGVPIITDSTLRRGKKLDRKERVSEQTYQLSRWT
PLVKDIMEDVIEDKLDTKHYPYISTRSSASFSSTAVSARYGHWHKNKTPGEYRTGPRVMV
FIIGGASFSEMRSAYEVTQANGKWEAIIGSTHTITPIKFLTDLQHPDFRESTRVSFEEPD
AGSDE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcacccataggactcaaggcggtggtcggtgaaaagattatgaatgatgtcatcaag
aaggtgaagaagaagggagaatggaaggcgttgattgtggaccagctgagcatgaggatg
ctatcctcctgctgcaagatgacagacatcatgtcagagggcatcaccattgtggaggac
ataaacaagcggcgagagcctcttcccaccctggaggccatttacctgattacccccaca
gacaagtctgtgcagaccctaattggagacttcaaagacccccattcagccaaatacaaa
gcagcccacgtcttcttcactgactcctgcccagacccactgttcaacgaggtagtgaag
agccgcgcctccaaatccattaagaccctgactgagatcaacatcgccttcctgccctat
gaatcacaggtgtactctctggacaacccggatgccttccaaagtttctacagcccccat
aagacccagctgaagaacccagtgatggagaggctggcagaccagcttgccaccctgtgt
gccaccctgaaggagtaccccgctgtcagataccgaggggagtacaaagacaatgccacc
ctggcccagctgttgcaggacaaactggacgcctacaaggctgatgaccccaccatggga
gagggtcccgataaggctcgttctcagctgataatcctggacagggcttttgaccccgtc
tcccccgtcctgcacgagctcaccttccaggctatgggctacgacctgctgcccatcgaa
aacgacgtctacagatatgattcccctgggatgggagacacttctcagaaggaggtcctg
ctgcacgaggacgatgacctgtgggtggggctcagacacaaacatatcgctgaggtgtcc
acggaggtgacacgccaactgaaggacttctctgctagcaagaggatgaacactgctgga
gagaagaccaccatgagggacctctctcagatgctgaagaagatgccccagtaccagaag
gagctgagcaagtactccactcacctgcagctggctgaggactgcatgaagcactaccag
ggcacagtggacaagttgtgtcgtgtggagcaggacctggccatgggtacagacgctgag
ggggagaagatcaaggaccccatgagggccattgtgcccatcctgctggacgctaacgtt
accacccacgacaagatccgcatcatcctcctctacatcttcctcaagaacggcatcacg
gaggagaacctgaacaagctcatccagcacgcccagatccctcctgaggacagtgaaatc
atcaccaacatggcccacctgggtgtgcccatcatcacagactccaccctccgcaggggg
aagaagctggacaggaaggaacgtgtgagtgagcagacctatcagctgtcccgctggaca
ccactggtcaaggacatcatggaggatgtgattgaagataagctggacaccaagcactac
ccctacatctctacccgttcctctgcctccttcagcagcactgcagtcagtgcccggtat
ggccactggcacaagaataagaccccaggcgagtaccgcaccgggccgcgcgtcatggtc
ttcatcatcggaggcgcatccttcagcgagatgcgctctgcatacgaggtcacgcaggcc
aacgggaagtgggaggccatcattggttccacccacaccatcacccccatcaaattctta
acggacctgcagcaccctgacttccgagagtccactagggtgtcctttgaggagccagac
gcaggctcagacgagtga
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integrated database retrieval system
