Coregonus clupeaformis (lake whitefish): 121541626
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Entry
121541626 CDS
T08357
Name
(RefSeq) sphingomyelin phosphodiesterase 4-like isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00600
Sphingolipid metabolism
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121541626
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
121541626
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
OAF_N
Motif
Other DBs
NCBI-GeneID:
121541626
NCBI-ProteinID:
XP_045064008
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Position
27:22603551..22621442
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AA seq
835 aa
AA seq
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MAAPALQQSSFLLANLKVDSTTKPFLQRCQELVKVIDDYPAKELHLIFPWLVESVFGSLD
GVIVGWNLRFLQARSNEYNIVMDFLDPSGPMMKLVYKLQADEYKYEIPVSFLPGPVKASI
QEGVLPDCPLFHNKLQFPLSGLQTLSLALNPFEYYMFMFASSLITPKNYPLGQHVSSSDN
AYFVLVDTYLKYFLPTEGSVPPSPFADNRGSVSPSAPRAPSVPFAGYGIHSTSLLKRHIS
HQPSVTADPAAQEIWRSEALLQVFVEMWLHHYSLEMYQKLQSPQLALLHYRLSMSSMPCQ
PLTPPGSGTLDTYQVLLPFHPLPPGLLEETFTPTEEHVLVVRLLVKHLHAFSCSLKPEQV
SSSPSAHSHASPLEEFKRVVVQRFVQQKLYVFLQHCFGHWPLDASFRAVLETWLSYIQPW
RYTGENTNPQTDQNKGVPEKWGLFVQENLLMYTKLFQGFLNRVVRIDLVNVKNALMVFRV
AKVFAQPNLSEMIQKGEQLFLEPEHVLHHRQHRVFLTPSHGGSFLSARQSVVTDRVFRVK
SHVYGLEGQDCQYKQMFGTELRGAVLKLIQIIAQARQTAKRISDQSAEVAANNSFMSWFG
MGSPDLNYTFNGGEVDDTGECVKKTHEFLERSLDYLCQIFRLNAGQLSQLMATLSSGQDD
GNSRQLPDCVQGENGLILTDLGRMQIINGLRRFEIEYQGDPELQPIRSYENAVLVRLFFK
ISSLVNERFGGHMEALCSRPDFLGRLGRHYLASPEAMADGRQRSPETWRTVERNRRPRLS
LRALASYRTLLMLLLLYLFGVLFSFGPMSSTLLILTGGFLYGLFITLFGDKLKSQ
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccagccttgcaacagtccagttttcttctggccaatctgaaagttgactcg
accaccaaaccttttctccagcggtgccaggagctggtgaaggtcattgatgactaccct
gcaaaggagctgcacttgatcttcccctggcttgttgagagtgtttttggcagtctggat
ggggtcatcgtgggctggaacctgcgattcctgcaggcacgcagcaatgagtacaacatc
gtcatggactttctcgatcctagtgggccaatgatgaagcttgtgtacaagcttcaagca
gacgagtacaagtatgaaatacctgtcagctttctccctggtcctgtaaaggcatccata
caggaaggcgtcctcccagattgtccactttttcacaacaagctgcagtttcctctgtct
ggtctgcagacactcagcctggcgctcaatccctttgaatattacatgttcatgtttgct
tccagtctcatcacaccaaagaactaccctctgggccagcatgtgagcagctcggacaat
gcgtactttgtgcttgtggacacctacctcaagtacttcctccctacagagggaagtgtt
cccccttctccattcgccgacaatagaggctctgtgtctccatctgctcccagggctccc
agcgtgccttttgcagggtatggtatccatagcaccagcctcctcaagcgccacatatcc
catcagccctcggtcactgctgaccctgcagcccaggagatctggaggtccgaggcatta
ctacaggtgtttgtggagatgtggctgcatcactactccctggagatgtaccagaagctg
cagtccccgcagctggcactgctgcactatcgtctcagtatgtccagcatgccgtgccaa
cccctgacccctcctggctctgggaccctggacacgtaccaagtacttttaccttttcat
ccactcccaccgggcctgctggaggagactttcaccccgacagaggagcacgttctggtg
gtgcgtctcctggtgaagcacctccatgccttctcctgcagcctgaagcctgagcaggtc
tcctcctcgccctcggcccactcccacgccagccccctggaggagttcaagagggtggtg
gtccagcgttttgtccagcagaagctctatgtgttcctccagcactgctttggacactgg
cctttagatgcctccttcagagcggtgttggagacttggcttagctacatccagccatgg
aggtacacaggagagaataccaatcctcagacagaccagaacaaaggtgtacctgagaaa
tggggcttgtttgttcaggagaacctgctcatgtacacaaagctctttcagggctttcta
aacagggtggtacgcatagacctggtcaacgtcaaaaatgcactaatggtcttcagggtg
gccaaagtcttcgctcagccaaacctatcagagatgattcagaaaggagagcagctgttt
ctggagccggagcacgtcctccaccaccggcagcaccgggtcttcctcactcctagccac
ggtggcagcttcctgtctgcccggcagtccgtggtgacagacagggtgttcagggtgaag
agccacgtgtacggcctggagggccaggactgccagtacaaacagatgttcggcacagag
ctgaggggcgcggtcctgaagctcattcagatcatcgcccaggcgaggcagacggccaag
aggatatcagatcagtcagctgaggtggcggctaataactccttcatgtcctggtttgga
atgggctcccccgacctcaactacaccttcaatggaggagaggtggatgacactggggag
tgtgtcaagaagacccacgagttcctggagaggtcactggactacctctgtcagatattt
cggctgaatgcagggcagctgtctcagctgatggctaccctgagctctggtcaggatgat
gggaactccaggcagctaccagactgtgttcagggtgagaacggactcatcctcacagac
ctgggccggatgcagatcatcaatggactgcgtagatttgagattgagtaccaaggagac
ccggagcttcagcccatcaggagctatgagaacgccgtgctggtcagactgtttttcaag
atctcgtccctggtgaatgagaggttcggaggtcacatggaagctctatgctcgcggccg
gacttcctgggccggttgggacgacactacctggccagccccgaggccatggcggacggc
agacagaggagcccagagacatggcgaacagtggagaggaaccgacggccgcgactaagc
ctgcgcgcactggcgagctacagaactctgctgatgcttctacttctctacctgtttggg
gtgctgttctcattcggccccatgtccagcacactactcattctaacaggcggctttctc
tacggactcttcataaccctgtttggagataaactgaagtcccagtag
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