Coregonus clupeaformis (lake whitefish): 121541629
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Entry
121541629 CDS
T08357
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121541629 (nefma)
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121541629 (nefma)
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Motif
Other DBs
NCBI-GeneID:
121541629
NCBI-ProteinID:
XP_041706723
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Position
27:complement(22697731..22703123)
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AA seq
921 aa
AA seq
DB search
MSYHPVDTVGSPFRRSMDSRTSYGRSSGTPSSGFRSQSWSRSSPNKPYKRSVNLPVARAY
SSTLLSSADSVDFSQTNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNSQIEEEIQAL
RQKQVSQSQLGDLYDQELQELRSMLEQIHHDKSQIQLDTDHIEEDIQRIRDRFDEEARIR
DETEGIIRALKKDMNDSELVKSELEKKVQSLQDEIAFIRNNHEEEVSELFSQVQASQVTM
ERKDFQKTDITKALREIRTQLEGHSNQNLQQVENWFMCRYSKLTDAAEQNKDAIKSARDE
ISDYRRQLQSKTVELESVRGTRESLERQLNDIEDRHNNDLSSLQETIHQLDNELKGTKWE
MARHLREYQDLLNVKMALDIEIAAYRKLLEGEETHFSTFPYRQAVTSSKKSKSGPPKLKV
QHKFVEEIIEEIRVEDEKSEIDVALAEIAQELSAALEAEAEAADDREEEGEDKGEEEGEE
AEGHGEEVEGDSEEVVASTEAQVSSSAPAEEEEEDKKDGDEDEDGGEGAEEGEKEEEGEK
EGKDEGEKGDDAEGGVEGEGAEEGEEEVEETAPESKASPDKEKAGEKEGSGGEEETAEGE
GEEEGGDKDEVAGSDKGSKDGDDKDEKDEKKGKDEKEDKTDEAAVAKTEAPKTDAPKSEA
PKAEVQKSEAPKVSKPDSLKAESPKAGSPKSESPKAGSPKHESPKAGSPKSESPKPGSPK
SETPKPAGSPKSESPKPAGSPTFESPKPAGSPKSESPKPAGSPKSESPKAESPKDDAPKP
EAPKSEAPKAAEEKVDKKSDSEEEKVENKDAAMSGDVEKSAPEDKKDDGKKEETDVISNG
VDESPTKDDPNQKDDPNQKVVITKTVETITTGEDGAKHVTKSVTVTETVKESEDVMQEKM
MSSKKMEKHSSQSVKVVTETE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccacccggtggacacggtagggagtccattcaggagaagcatggatagtagg
accagctacggccgctcctccggaaccccctccagcgggttccgttctcagtcctggtcc
cggtcaagccctaacaagccctacaagaggagcgtcaatttgccggtagccagagcgtac
agctccacactcctcagctccgccgacagcgttgatttcagtcaaacgaacggagactac
aagcgctccaacgagaaagagcagctccaggggctcaacgaccgtttcgccggttacatc
gacaaggtgcactatctggagcagcagaacagccagatcgaggaggagatccaggcgctg
cggcagaagcaggtgtcacagtcccagttaggcgatttatatgaccaggagctccaggag
ctgcgctccatgctggagcagatccaccacgataagtcgcagatccagctcgacacggac
cacatcgaggaggacatccagagaattagggaccgcttcgatgaggaagctcgcatcagg
gatgagacggaaggcatcatccgggcgctcaaaaaagatatgaatgactcggagttagtg
aagtcggagttggagaagaaagtccagtcactgcaggatgagattgcctttatccgtaac
aaccatgaggaagaggtgagcgagctgttttcccaggtgcaggcgtcgcaggtgaccatg
gagaggaaagacttccagaagacggacatcaccaaggcgctccgggagatccgcacccag
ctcgagggccactccaaccagaacctgcagcaggtggagaactggttcatgtgccgctat
tccaagctcactgatgctgcagaacaaaacaaagatgcaatcaagtccgcccgtgatgag
atttccgactaccgccgccagctccagtccaagaccgtggagttagagtccgtccgtgga
accagggagtcactggagaggcagctgaatgacatcgaggacagacacaacaatgacctg
tccagcctgcaggagaccatccaccagctggataatgagctcaagggcacgaagtgggag
atggcgcgtcatctgcgcgagtaccaggacctgctcaatgtcaagatggcccttgacatc
gagattgctgcatacaggaaactcctagaaggcgaagagacccactttagcactttccct
taccgccaagctgtaacctcctctaagaagtccaagtctgggcctcccaaactgaaggtc
cagcacaagtttgtagaggagatcattgaggagatcagggttgaggatgagaagtctgag
attgacgtggccctggcagagattgcccaggagctgtctgccgcactggaggcagaggca
gaggcagcagatgacagagaggaggaaggagaggataagggagaagaggaaggagaagaa
gcagagggacatggagaagaggtagagggtgactcagaagaggttgtagcctccactgaa
gcccaagtgagctccagcgcccctgctgaggaggaagaggaggacaaaaaggatggcgat
gaagatgaagatggaggagagggtgctgaggaaggagagaaagaagaagagggtgagaaa
gaaggaaaggatgagggtgagaagggagatgatgcagaaggtggtgttgagggagaagga
gcggaagagggcgaggaggaagtagaggagacagccccagaatcaaaggcctctcctgac
aaagagaaggctggagagaaggagggaagcggaggagaagaggagacagcagagggagag
ggagaagaggagggtggtgataaagatgaagttgcaggtagtgacaaaggatccaaagat
ggagatgataaggatgagaaagatgagaagaaaggcaaggatgagaaagaggacaaaaca
gatgaggcagctgtagccaagacagaggctcccaaaacagatgcccccaagagtgaggcc
ccaaaagctgaggtccagaaatctgaggccccaaaggtctccaagccagactccctgaaa
gctgaatccccaaaggctgggtcccctaagtctgagtcaccaaaagctggatcccccaaa
catgaatccccgaaagctggttcccctaaatctgaatccccaaaacccggctcccccaaa
tctgaaactcccaaacctgctggatcccccaaatctgaatcacccaagcctgctggttcc
cccacatttgaatcacccaaacctgctggttcccccaaatctgaatcccccaaacctgca
gggtcccccaaatctgaatcccccaaagcagagtcccctaaggatgatgctcccaaacca
gaagctccaaagtcagaggcccccaaggctgcagaagagaaagtagacaaaaagagtgat
tcagaggaagagaaggtagaaaataaagatgcagctatgagcggagatgtggagaagagt
gccccagaggacaaaaaggacgatgggaagaaagaggagacggatgtgatctcaaatgga
gtggacgagagccccaccaaagatgaccccaaccagaaagatgaccccaaccagaaggtg
gtcatcaccaaaacggtggagaccatcaccactggagaggacggagccaagcatgtcact
aaatcagtcactgtcaccgagactgtgaaggagtctgaggatgtgatgcaggagaagatg
atgtccagcaagaagatggagaaacattcttcccagtctgtcaaggtggtgaccgaaacc
gagtga
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