Coregonus clupeaformis (lake whitefish): 121541639
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Entry
121541639 CDS
T08357
Name
(RefSeq) ephrin-A5 isoform X1
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121541639
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121541639
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121541639
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121541639
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121541639
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121541639
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121541639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121541639
NCBI-ProteinID:
XP_041706736
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Position
27:complement(23322500..23373173)
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AA seq
231 aa
AA seq
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MPQVEMILCVSLVLWTCVYGQEPASKVVSDRYAVYWNRTNPRFYRGDYHIDVCINDYLDV
FCPHYLVSVPEERTEHYVLYMVNYDGYSSCDHTAKGFKRWECNRPHSPNGPLKFSEKFQL
FTPFSLGFEFRPGREYYYISSTIADNGRRSCLRLKVFVRPASKYNCVKTVSVHDRVFDVN
EKVDNSLEPRDDTSHESAEPSRGDVNSVGRVQTAGLLVTSSLLFLAAILSS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggtggaaatgatcctgtgcgtttccctggtgttatggacgtgtgtctacggc
caagagccggcctccaaggtggtgtccgaccgctatgccgtctactggaaccggaccaac
cccaggttctaccggggtgactaccacatcgacgtgtgtataaacgactacctggatgtt
ttctgtccccactacctggtctctgtccccgaggagcggacagagcactacgtcctctac
atggtcaactatgacggctacagctcctgtgaccacactgccaagggcttcaaacgctgg
gagtgtaacaggccccactcccccaacggacccttgaagttctcagagaagttccagctc
ttcacccccttctctctgggttttgagttccgccccggcagagagtactactacatctct
tccaccattgctgacaatggaaggagaagttgcctacgactgaaggtgttcgtcagacca
gcaagtaaatacaattgtgtgaaaactgtcagtgttcacgatcgggtctttgacgtcaat
gagaaagtggacaattccctagaaccaagagatgacaccagccacgagtcagccgagcca
tcccgaggtgacgtcaactccgttggccgggttcagaccgccggcctgctggtgacctcc
tccctgcttttcttggcggccatcttgtcttcatag
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