Coregonus clupeaformis (lake whitefish): 121541646
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Entry
121541646 CDS
T08357
Name
(RefSeq) calnexin isoform X1
KO
K08054
calnexin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04141
Protein processing in endoplasmic reticulum
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121541646
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121541646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121541646
04131 Membrane trafficking [BR:
cclu04131
]
121541646
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cclu04091
]
121541646
Chaperones and folding catalysts [BR:
cclu03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
121541646
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121541646
Autophagy
ER-phagy
Other ER-phagy associated proteins
121541646
Lectins [BR:
cclu04091
]
L-type lectins
121541646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
V_ATPase_I
Piezo_TM1-24
Spore_coat_CotO
DDHD
CLN3
Zip
Serinc
Motif
Other DBs
NCBI-GeneID:
121541646
NCBI-ProteinID:
XP_041706754
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All DBs
Position
3:complement(9861845..9885730)
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AA seq
628 aa
AA seq
DB search
MELNVRCVLLLALGLCSTLLMTTVAAHQEEEEPIMEMAGDVEDELEDLGLGEELLDGEVE
PEEADTPTGPPPAPKVIYKAPEPMGEHFFAESFDRGTLDSWVLSKAKKEDIDEDIAKYDG
KWEVEDMKDSKLPGDKGLVLKSRAKHHAISAQLLRPFIFDTKPLIVQYEVNFQQGIDCGG
AYVKLLSQTPHLNLDEFVDKTPYTIMFGPDKCGEDYKLHFIFRHRNPKTGEYEEKHAKKP
DADLRTYYTDKKTHLYTLVLNPDNSFEVLVDQTVVNSGNLLTDVTPPINPAAEIEDPDDH
KPEDWDERPKIQDPDAVKPEDWDEDAPKQIPDEDAVKPDGWLDDQPEYTSDPDAVKPEDW
DEDMDGEWEAPQVPNALCETAPGCGAWQRPMIDNPNYKGKWKAPMIDNPNYQGVWKPRKI
ANPDFFEDLHPFRMTPFIAVGLELWSMSSDIFFDNFFISNERHTAERWANDGWGMKKAAE
GAAEPGLVNQMMTAADERPWLWVVYVLTVAVPFVLLIVFFCTGKKAAAPAAADYKKTDEP
QPDVKEEEEEKAEEDQVKEEKSQPAAAAEKKSDAEDSPAEKEDEEEEEEEEEAAVNEEGE
EEDDEAADQKQEDDVLRRSPRNTKGRKD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaatgtgaggtgtgttctgctgctggccttgggcctgtgctccacgctgcta
atgaccacagtggccgcccaccaggaggaggaggagcctatcatggagatggcgggagac
gtggaggacgagctggaggacctgggccttggggaggagcttctggacggggaggtggag
ccagaggaggcagacacaccaacgggaccacctccagcccctaaagtgatctacaaagct
cccgagcccatgggggaacacttcttcgccgagtcctttgacagggggaccctagacagc
tgggtcctgtcaaaggccaagaaggaggatattgatgaggatatcgccaagtatgatggt
aaatgggaggtggaggacatgaaggacagcaagctgcccggagacaagggcctggtcctc
aagtcccgtgctaagcaccacgccatctcagcccagctcctcaggcccttcatctttgac
accaaacccctcatcgtccagtatgaggtcaacttccagcaggggatcgactgtggtggt
gcctacgtcaaactgctctcccagaccccacacctcaacctggatgagtttgttgacaag
actccctacaccatcatgttcggaccagacaagtgtggcgaggactacaagctgcacttc
atcttccgccacaggaacccaaagactggcgagtatgaggagaagcacgccaagaaaccc
gacgcagacctgcgcacctactacaccgacaagaagacccacctttacacactggtgttg
aacccagacaacagctttgaggtgcttgtagaccagacggttgtgaacagtggtaacctg
ctgacagatgtgaccccacccatcaaccctgccgccgagatcgaggaccccgatgaccac
aagccagaggactgggacgagaggcccaagatccaggaccctgatgctgtcaaacctgag
gactgggatgaggatgcaccaaaacagatcccagatgaagatgcagtgaagccagacggt
tggctggacgatcagccagagtacaccagtgaccccgacgcagtcaagcctgaggactgg
gatgaggatatggatggggagtgggaggcccctcaggtccctaacgccctctgtgagacc
gcccccggctgtggcgcctggcaacggcccatgattgacaaccccaactacaagggcaag
tggaaggcccccatgatcgacaatcccaactaccagggtgtgtggaagcccaggaagatc
gccaacccggacttcttcgaggacctccatcccttcaggatgacccccttcatcgccgtg
ggcctggagctgtggtccatgtccagcgacatcttctttgataacttcttcatctccaac
gagcggcacacggccgagcgctgggccaatgacggctggggcatgaagaaagctgctgag
ggagccgctgagcccgggctggtgaaccagatgatgaccgcagcagacgagcgtccctgg
ttgtgggtagtctacgtgctgactgtggccgtgcccttcgtcctcctcatcgtcttcttc
tgcaccggaaagaaggcggcggctccagctgcagccgactacaagaagacagacgagccc
cagccagacgtgaaggaggaggaagaggagaaggctgaggaggaccaagtcaaggaggag
aagagccagccagcagcagcagcggagaagaagagtgatgcagaggacagccctgcagag
aaagaagatgaagaggaggaggaggaggaagaagaggcagcagtaaatgaggagggggaa
gaggaagatgatgaggcagctgatcagaaacaagaagatgacgtcctcaggaggtccccc
agaaatacgaaagggagaaaggactga
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