Coregonus clupeaformis (lake whitefish): 121541661
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Entry
121541661 CDS
T08357
Name
(RefSeq) paired box protein Pax-8-like isoform X1
KO
K09293
paired box protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121541661
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121541661
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
HTH_SB
Motif
Other DBs
NCBI-GeneID:
121541661
NCBI-ProteinID:
XP_041706783
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All DBs
Position
27:complement(24139291..24151800)
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AA seq
473 aa
AA seq
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MWKTYTELSRPEAVKFLARSDLIGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPC
DISRQLRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAW
EIRDRLLAEGVCDSDTVPSVSSINRIIRTKVQLPFNLPLDGKGLSPGHTLIPSSAVTPPE
SPQSDSLGSTYSISGLLGIPQPSQEGKRSHDDSDQESCRHSVDSQGSAGVPRKQLRPEHF
PPQHLDCGFDRHHYPPDFSSAAASKTEQTVYPLSLINGSLEDGKTSLSTSSAAIGRNLAA
HQGYTVVTDPLQPLPLCLKQEMSPEVTSTSPSPNVVANSAFLELQSLQAPVTVSSSCSSS
NHFPHAFNSFSHHAPVYGHFSSQSLIAGRDMVSSTLPGYPPHIPSSGQTGYSSSAITGMV
AGADYSGQTYTHSPYTSYSEAWRFTNSSILGSPYYYGTASRTAPPSTTAYDHL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacttacacagagctgtctagaccagaggctgtcaaatttctagctagatcc
gacttaattggtcatgggggtcttaaccaactaggcggaatgtttgtgaacggccgtccg
cttccggaggtgatccggcagcgcatcgtggacatggcccaccagggcgtgcgtccctgt
gacatctcccggcagctccgtgtcagccacggctgtgtcagcaagatcctgggacgctac
tacgagactggtagcatcaagccaggagtgattgggggctccaagcccaaggtggccact
cctaaagtggttgataagatagcagattacaagcgtcagaaccccaccatgtttgcctgg
gagatcagagacaggctgctggcagagggggtgtgtgacagcgacactgtgcccagtgtc
agctccatcaacagaataatccgaaccaaggtgcagctgcctttcaacctgcctctggac
ggcaaaggcttaagcccaggacacacactcattcccagttcagctgtcactcccccagag
tcgccccagtccgattccctgggctccacctactccatcagtggcctgctggggatacca
cagcccagtcaagagggcaagaggagccatgacgacagtgaccaggagagctgtagacac
agtgtggactctcagggcagcgcaggcgttcctaggaagcagttgagaccagagcacttc
cccccgcagcacctggactgtggctttgaccgccaccactaccccccagacttcagctct
gcagcagccagcaagaccgagcagactgtgtaccctctctcgctcatcaatggcagtcta
gaagacgggaagaccagcctctcgacatcgagtgctgctattggtcggaatctggcagcg
caccagggctacactgtggtgacagacccgctacagcccctcccactttgtctgaaacag
gaaatgtccccggaggtgaccagcacaagcccctccccaaacgtggtggccaactctgct
tttctagagctgcagtcgctgcaggcccctgtcactgtcagtagcagctgcagcagctcc
aaccatttccctcatgcgttcaactcattctcccatcatgcaccagtgtatggccatttc
agcagccagtctctcatagcagggcgggatatggtgagctccactctccccggctaccct
cctcacatcccctccagtggccagacaggctactcatcctctgccatcactggcatggta
gcaggtgcagactactctggccagacctacactcactccccctacacctcctacagtgaa
gcttggagattcaccaactcaagcattctcggttcaccctattactatggcacggcctcc
cgcaccgctccaccatccaccactgcctacgaccatctctag
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