Coregonus clupeaformis (lake whitefish): 121541669
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Entry
121541669 CDS
T08357
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121541669
03041 Spliceosome [BR:
cclu03041
]
121541669
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121541669
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121541669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
FUBP_C
Motif
Other DBs
NCBI-GeneID:
121541669
NCBI-ProteinID:
XP_041706803
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All DBs
Position
27:complement(25121324..25147394)
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AA seq
568 aa
AA seq
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MMMMAELVQGQASVVQPGTKADGFADALHRARQIAAKMGSDQMPHMNNSSPVLDPSLYGY
GGQKHSMDDGVGNQLGGMVHQRAIMTEDFKVPDKMVGFIIGRGGEQITRIQLESGCKIQI
AADSGGMMDRACTLTGSPENIEQAKRLLSQIVDRCRNGPGFHSEMDGNSAIQEILIPASK
VGLVIGKGGDTIKQLQERTGVKMIMIQDGPMPTGADKPLRITGDPYKVQQARELVVEIIR
DKDQGDFRAGRGDFGSRLGGSSLDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPVS
PSPSDDGISPDRIAQVMGQSDRCQHAVHLINELVHTAQVQERDGFGSPVGPRGRGRGRGD
WNMGAPGGLQEVTYSIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIF
SIRGTPQQMEMARQLIDEKIGASGMGGNSSFGLNPFGQGPATPHQNGPQTFLAGGWGTTY
QTWQPQGQQDPSQQSQAQSSGPDYSKAWEDYYKKQSQAAGPGSQQSSPPDYSAAWVEYYR
QQGAYYGQGAQQTQAPGLQRGHPLVEDF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagttggtacagggacaggcctcggtggttcagcctggaacgaaa
gcagatggcttcgccgacgctttacaccgggcccgacagattgcggctaaaatgggaagt
gaccagatgccccacatgaacaactcctctccagtcctagacccctctctctacggctac
ggaggccagaagcactcaatggatgatggagtaggtaaccagctgggtggaatggtacat
caaagggctattatgacagaagacttcaaagtgcctgataagatggttggattcatcatt
ggaagaggaggagagcagatcacgagaattcagttggagtcaggctgcaagatccagatt
gctgcagacagcggaggcatgatggacagggcctgcaccctaactggaagtccagagaac
attgagcaggccaagaggctgctgagccagattgtggaccggtgtcggaacggcccaggc
ttccacagcgagatggacggcaacagcgccatccaggagatcctcatccctgccagcaaa
gtgggccttgtcattggcaagggaggggacaccatcaaacaactgcaggagagaacagga
gtgaagatgatcatgatccaggatggccccatgcccactggagcagacaaacccctgaga
atcactggggacccctacaaagtgcagcaagcacgagagcttgtggtggagataatccgg
gacaaggaccagggagacttccgggccggcaggggagacttcggatccagactgggggga
agcagcctggatgtggcagtccccaggtttgctgtgggcatcgtcattggcaggaacgga
gagatgatcaagaagatccagaatgactctggggtcaggatccagttcaaaccagtgtcc
ccctctccttcagacgatggcatcagtcccgaccggattgcccaggtgatgggccagtct
gaccgctgccagcatgcagtgcacctcatcaacgagctggtccacacggcacaggtacag
gagcgggatggctttgggagtcccgtggggcccagaggccggggcagaggccgcggagac
tggaacatgggtgcgcccggtggactgcaggaggtgacgtactcaatacctgccgacaag
tgtggcctggtgattggaaaaggtggagaaaccatcaagaacatcaaccagcagtccgga
gcgcatgtggagctgcagagaaacccgccgcctaacaccgaccccaacgtgcgcatcttc
tccatccgcggcaccccccaacagatggagatggcccgccaactgatcgatgagaagatt
ggggcctcaggaatggggggcaacagcagttttggtctgaaccccttcggccaaggacca
gctacccctcatcagaatggaccccagacattcctggcaggaggatggggcacaacatat
cagacatggcagcctcagggccagcaggaccccagtcagcagagccaagcccagagcagt
ggccctgactacagcaaagcatgggaggattactacaagaaacagagccaggcagcaggc
cccggctcccagcagagctcccctccggactacagtgctgcctgggtggagtattacaga
cagcagggggcctactatggccagggtgcacagcagacacaggccccaggccttcagaga
ggacaccctttagttgaagatttttga
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