Coregonus clupeaformis (lake whitefish): 121541727
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Entry
121541727 CDS
T08357
Name
(RefSeq) guanine nucleotide exchange factor VAV2 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121541727
09142 Cell motility
04810 Regulation of actin cytoskeleton
121541727
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
DUF7145
RHG20_PH
SH2_2
C1_2
PH_10
CDC24
PLU-1
Nup88
Motif
Other DBs
NCBI-GeneID:
121541727
NCBI-ProteinID:
XP_041706921
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All DBs
Position
27:29870141..30104789
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AA seq
888 aa
AA seq
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MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
VQIKGMRPFPSEDTALNEDDVYRSLEDLADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLSPQDMGA
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFIDFKERLLIYGQYCSHMETAQKTLDE
LIATREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDRPDKQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSIV
NRTKQDRYIFLFDKVVIVCKRKGYCYELKEIIELQSYKMSDDPMNNRDMKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKAMANLHNFQMHTFEKNTNCR
ACKMLLRGIFYQGYYCSRCGTGAHKECLECITICKINPLDTDPGLPSSGPKMVAVRNYHG
TPVPPGKTPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNNCVKPCLDPKPLFQS
FPSRQPSRETDYYGYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNDE
VKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSRERGPAS
RASTRSPGEPIPAAIGASYNFSFLSPQGLNFSSQSSAPFWSVFTPRVVSTAVARYNFAAR
DMRELSLREGDIVKIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtggaggcaatgcgggcggtggttgatagactgcaaggttttacccccaaac
caccgggtcgtgtggccttctgcagcggtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccagatgttgcacaacttgtcaccggggtctgtggacctaaaggagatc
aacttcagaccccagatgtcccagtttctctgtctgaagaacatccggacgttcctcaag
gtgtgccacgacaagtttggcctgcgcaacagtgagctgtttgacccatttgacctgttt
gatgtcagggacttcggcaaggtgatctcagccctgtccaggatctcccaccacagcatc
gtacagatcaaagggatgaggccttttccttcggaggacactgctctgaatgaggatgac
gtgtaccggagtcttgaggacctggcagatgagcatgacgtgggggaggatgacatctac
gactgtgttccctgtgaggacgatggagatgacatctacgaggacatcatcaaggtggaa
gtaagacaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
aattgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgattcccctgaagcaagttctaagtccacaagacatgggggcc
atctttgtaaatctagaggatgtgattaaggtccactttgctctgctgagggccatcgac
ctcaacatggtgagcggaggcaacggtctggggaagatcttcatagacttcaaggaaagg
ttgctgatctacggccagtactgcagccacatggagaccgctcagaagacactggacgag
ctcatcgccacgcgggaggacgtcaagatgaaagtagaggagtgcactatgaaggtgcag
gaagggaagttcaagctccaggacctgctggtagtgcccatgcagagagtactaaagtac
cacctcctactcaaggaactggtgagtcattcaactgaccgacctgataaacagcagctg
aaggaggcgttggaggccatgcaggacttggctatgtacatcaatgaagtgaagagagac
aacgagaccttgaagaagattagtgaattccagaactcgatcgagaaccttcagcaggtc
aaactggaagagtatggcagaccaaagatagatggagagctcaaggtgtcctccatagtc
aaccgaacaaagcaggaccggtacatattcctgtttgataaagtggtgattgtgtgcaag
cggaaaggctactgctatgaactgaaagagatcattgagctacagtcatacaaaatgtct
gacgaccccatgaacaacagggacatgaagaagtcgagtggaaaaatgtggtcctatggc
ttctacctgatccacctgcaagggaagcagggtttccagttcttctgtaaaacagaggac
accaagaggaaatggatggagcagtttgagatggccatgtcaaacatcaagccggagaaa
gccatggccaatctgcacaacttccagatgcacacgtttgagaagaacaccaactgccga
gcttgcaagatgctgctgagggggatcttctaccaggggtactactgttcccgctgtggg
actggagcacacaaagagtgtctggagtgcatcacaatctgtaaaatcaatccactcgac
acggaccctggactaccgtcatcaggccctaagatggtggcagtaaggaactatcatggg
acgcctgttcctccagggaagactccactatcctttcagacaggggactttatcgagctg
ctgaagggggaacctgacaccacctggtgggagggaaagcttattcaaacccagaagagt
ggattctttcctaacaactgtgtaaagccttgtttggacccaaagcctttgttccagtcc
ttccccagccggcagccctcaagggaaacagactactatggatacccctggtttgctggc
aacatggagcggacacaggctgacaacctgttgaagtcccacagcagtggaacatacctg
atcagagagaggactgctgaggcagaaaggttcgccatcagcatcaagttcaatgatgaa
gtgaagcacattaaagtcattgagaaagacagctggatccacatcactgaggctaagaag
tttgagagtctactggagttggtggagtactatcagtctcattcgctgaaggagagtttc
aagctgctagacacgacgttgcgatatccctacaaatctagagaacgagggccggcgtca
cgggccagcacccgttctccaggtgagcccatccctgcagccattggcgcttcctacaac
ttctccttcctcagtcctcagggtctcaacttctcctctcagagctcagcccccttctgg
tcagtgttcacgccgagggtggtcagcacagcggtggccaggtacaactttgcagcacgg
gacatgagggagctgtcactcagagaaggggacatcgtcaagatctacagcaagattgga
ggagaccagggctggtggaagggagaggccaacggcaggattggctggtttccctcaaca
tacgttgacgaagaaggagttcagtga
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