KEGG   Coregonus clupeaformis (lake whitefish): 121541732
Entry
121541732         CDS       T08357                                 
Name
(RefSeq) protein turtle homolog A-like
  KO
K22655  immunoglobulin superfamily member 9
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121541732
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  IGSF9
   121541732
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig V-set fn3 C2-set_2 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N FAM176
Other DBs
NCBI-GeneID: 121541732
NCBI-ProteinID: XP_041706937
LinkDB
Position
27:complement(30421516..30460472)
AA seq 1728 aa
MAPKRDYFLDVTIVTALCLLCVSHGQQPEVRAKEGGVVEMVCRLPPTDTGASASLHVVEW
VRQGFDIPVLIKFGVYAPRVHPNYEGRVSLVRNTVLRVKGLLMEDQGLYECRILLLDKTM
DETHNGTWTLLSVTAPPIFTKTPPPVLEALVGNPLSLACVARGNPQPTITWAKDGTLIGG
DKVEVLSGTLSLRAVSTEAGGRYECLATNTEGNVTHVTKLKVKGPPVIVIPPKNTALNLT
QNALLRCQAVADPPNMTYVWQRQGENVHHIEALKSRVKIMVDGTLLITRVTPEDSGNYTC
MPTNGLLTPPTASASLTVRHRAQALLMPQQTYLPTGLGGLVSCPVRAQPPLLRVDWTKDG
QPLNLAMYPGWTLTSEGSVFMATVNDDATGVYTCTPYNSFGTMGQSGPTTVILQDPPSLN
VSPRKEYREEVGRKLVIPCQTTGEPAPTVTWSKVGPATLSQYSIAANGSLLLFPLSKDHQ
GEWECSVTNLVATVKASTLISVLGTSPHAATLVSVSPGFKQANVSWEPGFDGGYPQTFTV
WLKQMSAGDSGVKQEWLSVPVLSSSGSSLQVTGLVPDTEYQFSVLPHNKVGTGPFSEIAT
IRTLNPLPRRAKLEPPTSLSANKSSAGIVLQWSPVAQFPPITGFVLQSRSEQGEWLNLDE
DISANRSVMIIPGLRKDSVYELRLLSRRGELLSEPSPSVNVSNMGMDMYPASSRLLEFVP
EPLLAGVMGGVAFLCLALILVVGTVCIISHKRDQRRRKKKDDLPPAIYKSPSSNGSLANS
PDSVLKQKLLHSHYPGSTSPSCSSSQSDHSSFGRPSRGEYQDQCQQLLSCRPPPPHYAPH
HHHHLPRTGSSPTSPLELISRGPDSLFMMQPYDQASIHISHNMRSLRKDFPQSTGVQRSV
SLRSEKSVRREPPFVLSVDLPPCGGSNPNPTTRVRAMAKHLSLHGRFYLDGEQDSFAGHP
GKSSPYSDSNSDMYPQTSLEESNPGYTSLKRAVQPATASTLVLQMEHERETGNMSRCLKL
AREREELERKLRKYTLERNATLDGKSERPGRDEESCRETEECDPIWKPQESTSPQNHPHH
CDPQANLGSSSMAKGPLSPSYIHWEASPLTSATSLVAAHHTPSERTATLHCDRPVTQCPF
LSPVTQHPLRDKRAEGHSKRRVSHQPLERQEGKEAARVKTHTGLCDATHMSTEMKGDDSE
SHEWNSKSNQCHSKSKPDVSVNKVPGSWKVELARSQPFEKPSQHTLVDLLDCIEMSVDEP
EDEGSVDPPTNPIMLQRHDLLAEKDHRRPQTTKEVRRGHPLDHRKSPVSREEREKWHRRS
PWGRSPATIQPPRPVLRKALSLGGSQNGDDRHHQRSHSLDSRRQSQVNFLTPDAWVDSLS
QENCSSPFSIRPDSVFWEPEFTSAPETNHTEAPPACPPPPPPPQDPQPPSRAPQQLYEAY
KGNMHIPKVRKLVLERQQPLPPTPPPVPSGPIHHPHNPRKKASIFPDASRWPITYQEALR
SVQRMEARKNASLPRDHREHCRGRTTAPSLVRGYSWPAPLHTSQPPQEEEKQEVVEEEEE
EEEEEEEEEGEERYGGHETEVEIGRYHRGVPDSGGSYSSYTSQSSGRGSLEPPNGRLSIC
LSPTLTSSPETIEEIQGNTEETRLQDMEALKRRKASVDENYEWDSTDVSIQPGDQDLEGR
SLFSSVSLLKSTPSMHHSRKGLKESVQFQGHHHVTSRYSDPEPETVLF
NT seq 5187 nt   +upstreamnt  +downstreamnt
atggcaccaaagagggactatttcctggatgtcaccatagtgactgcactctgcctgctg
tgtgtcagccatggtcagcagccagaggtgcgtgccaaggaagggggtgtggtggagatg
gtgtgtagactgccacccactgacacgggtgcgtctgcatcattacacgtggtagaatgg
gtgcgccagggctttgacatcccagtcctgatcaagtttggagtgtatgctcctcgggtg
catcccaactacgagggccgtgtctctctggtcaggaacactgttctgagagtgaagggg
ctcctcatggaggaccagggcctgtacgagtgtcgcattctcctgctggacaaaaccatg
gacgagacccacaacggcacctggaccctactctctgtgactgctcctcctattttcacc
aagacccctccccctgtcctggaggctctagtggggaatcctctttctctagcctgtgtt
gctcgtggcaacccacaacccaccataacctgggctaaagatggtactctgattggagga
gacaaggttgaggtgctgagtgggacgttgtctctcagagcagtgagcacagaggccgga
ggacggtatgaatgtctcgccaccaacacagagggcaatgtgactcatgtgacaaagctg
aaagtcaaaggtcctccagtcattgttatccccccgaagaacacggctctcaacctgacc
cagaatgccctcctgcggtgccaggccgtggctgatccgcccaacatgacctatgtgtgg
caaaggcagggagagaatgtccatcacatagaggctctgaagtcccgtgtgaagatcatg
gtggacggcaccctccttatcacccgcgtcaccccagaagattctgggaactatacctgc
atgcccaccaatgggcttttaactccgcctactgcatccgccagtctcactgtgagacac
cgtgcccaggctctcctgatgcctcagcagacatatctccccacaggcctggggggactg
gtctcctgccctgtgagagcccagccccccctgctccgtgttgattggaccaaggatgga
cagccactgaatctggccatgtacccaggatggacgttgacgtctgaaggctcggtgttc
atggcaactgtcaatgatgatgcaacaggcgtgtacacgtgcaccccctacaacagcttc
gggaccatgggtcaatcagggcccacgacagtcatcctacaggaccccccgtcactcaac
gtgtccccccgaaaggagtatcgagaggaggtggggaggaagcttgttatcccctgccag
accactggagagccagcccctactgtaacctggagcaaggttggacctgccacactctct
cagtactctatagcagccaacggctccctgctgctgtttcctctcagtaaagaccaccag
ggggagtgggagtgcagcgttaccaacctcgtggccactgtcaaagccagcactctcatc
tcagtgctgggcaccagtccccatgctgccaccctggtgtctgtgtctccagggttcaag
caggccaatgtgtcctgggaaccaggctttgatgggggatacccccagacattcactgtc
tggttgaagcagatgtcggcgggtgacagtggggtgaaacaggagtggctctctgtgccc
gtgctctcctcctctggctccagtctgcaggtgacagggctggtccctgacacagagtac
cagttcagtgtcctgccacacaacaaagtgggcactgggcctttcagtgagatcgccacc
atccgaactctgaatccactcccaaggagagcgaaactagagccgcccacatcattgtca
gccaataagagctcggcaggtatagtcctgcaatggtctcctgtggctcagttcccgccc
atcactggatttgtcctccaatcgcgctccgagcaaggggagtggttaaatctagacgag
gacatcagtgccaatagaagtgtgatgatcattccaggtctgcgcaaggactctgtgtac
gagctgcggctgctgtcccggcgaggggagttgctgagcgagcctagtccatcagttaac
gtctccaacatggggatggatatgtaccctgccagttcccgcctcctggagtttgtaccc
gaaccgctattggctggagtgatgggaggcgtcgccttcctgtgtttggccctcatcctg
gtcgtagggacagtgtgtatcatcagtcacaagagagaccagcgacgcaggaagaagaaa
gatgatctccctcctgccatctataaaagcccctcctcaaacgggtcccttgctaacagt
ccagacagtgtgctgaagcagaagctcctccattcccactatcctggctccacctccccc
tcctgctcctcctcccagtcggaccactcctctttcggcagacccagccgcggtgagtac
caggaccagtgccagcagctgctctcctgccgcccacctcctcctcactacgccccccac
caccaccaccacctccccaggacaggctcttctcccacttcccctctagagttaatctcc
agaggccctgacagtctcttcatgatgcagccctacgaccaggcctccatccacatttcc
cacaacatgagatccctgaggaaagacttcccacaatccacaggggtccagaggtcagtg
tcccttcgctctgagaagagtgtgaggagggagccgccgtttgttctctcagtggaccta
cccccctgtggtggatctaaccccaaccccacgaccagggtccgggccatggccaaacac
ctttccctccatggacgattctatctggatggggagcaggacagttttgctggacatcca
ggcaagagtagtccctactcagacagtaactcagacatgtacccccagacaagcctggag
gagagcaacccaggatacacgtcactaaagcgggccgtccagcccgctaccgccagcacc
ctggtgctacagatggagcatgagagggagacgggcaacatgagcaggtgtctgaagctg
gcccgggagagagaggagctggagagaaagctacggaagtacacgctggagaggaacgct
actttagatgggaagagcgagagaccaggcagagatgaggagagctgtagagagactgaa
gaatgcgatcccatatggaaacctcaggaaagcacctctccacaaaatcacccccatcac
tgtgacccccaggccaacttggggagctctagcatggccaaagggcctttgtccccatct
tatattcactgggaggccagccctctcacctcagccaccagcctggtcgcagcccatcac
accccctctgagaggacagcgaccctccactgtgaccgtccagtcactcaatgtcccttt
ctgtcacctgtcacacaacaccccctcagggataagcgagcagagggtcactctaagagg
agggtgagtcaccagccactagagaggcaagaagggaaagaagctgcgagggtcaagaca
cacacagggctttgtgatgctactcacatgtcaacagagatgaagggagatgactcagag
tcacatgaatggaacagcaagagtaatcaatgccattccaagtctaaaccagatgtatct
gtcaacaaagtgcctggttcatggaaagtggagttagcaaggtcacagccatttgaaaag
ccatctcaacacacattggtggatctcttagactgtatagagatgagcgtggatgaacca
gaggatgaaggctcagtggatcctcctaccaatcccataatgctccagagacatgaccta
ttggccgagaaagaccacagaagaccgcaaaccacaaaagaagtccgcagaggccatcca
ttggaccacagaaagagcccagtgtctagagaggagcgggagaagtggcacaggaggtca
ccttggggcagaagcccagctaccattcagcctcccaggccggtgctcaggaaggccctc
agtctaggaggctctcagaacggggatgaccgccaccaccagcgcagccacagtctagac
tccaggagacaatcccaggttaacttcctgacgcctgatgcctgggtagactctctcagc
caggagaactgctcctctcctttctccatccggccagactctgtgttctgggaaccggaa
ttcacctcagctcctgagaccaaccacacagaggccccccctgcctgccctcctccccct
cctcccccccaggacccccagcctcccagcagggccccacagcagctttatgaagcatac
aagggtaatatgcacatcccaaaagtaagaaaactggtgctggagagacagcagccgctc
cccccaacccctcctccagtgccttcgggccccatccaccacccccacaacccccgcaaa
aaggcctccatcttcccagacgcctccaggtggcccatcacctaccaggaggccctgagg
tccgtgcagcgcatggaggccaggaagaatgcctctctccccagggaccacagggagcac
tgtagaggcagaactacagctccctccctggtcaggggttacagctggcctgcacccctt
cacacctctcagccaccccaggaggaggagaagcaggaggtggtagaagaggaggaggag
gaagaggaggaggaggaggaggaggaaggagaggagaggtatggggggcatgagacagag
gtggagattgggaggtatcatcggggagtgccagactcaggggggagctacagtagctat
accagccagagcagtggcagggggagtctggagcctcccaatgggcgcctgtccatctgc
ctgtccccaaccctcaccagctctcctgagaccatcgaggagatacaggggaacacagag
gagacacgcctacaggacatggaggcattgaaaaggagaaaggcctcagtggatgagaac
tatgagtgggattcaactgatgtgtccattcagccaggagaccaagaccttgaaggcaga
agcctgttctcctcagtgagtctactgaagtctactcccagcatgcaccattccaggaag
ggcctcaaagagtcagtccaattccagggtcatcaccatgtgaccagccgctactcagac
cccgagccagagactgtgctgttctga

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