Coregonus clupeaformis (lake whitefish): 121541732
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Entry
121541732 CDS
T08357
Name
(RefSeq) protein turtle homolog A-like
KO
K22655
immunoglobulin superfamily member 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121541732
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
IGSF9
121541732
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FAM176
Motif
Other DBs
NCBI-GeneID:
121541732
NCBI-ProteinID:
XP_041706937
LinkDB
All DBs
Position
27:complement(30421516..30460472)
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AA seq
1728 aa
AA seq
DB search
MAPKRDYFLDVTIVTALCLLCVSHGQQPEVRAKEGGVVEMVCRLPPTDTGASASLHVVEW
VRQGFDIPVLIKFGVYAPRVHPNYEGRVSLVRNTVLRVKGLLMEDQGLYECRILLLDKTM
DETHNGTWTLLSVTAPPIFTKTPPPVLEALVGNPLSLACVARGNPQPTITWAKDGTLIGG
DKVEVLSGTLSLRAVSTEAGGRYECLATNTEGNVTHVTKLKVKGPPVIVIPPKNTALNLT
QNALLRCQAVADPPNMTYVWQRQGENVHHIEALKSRVKIMVDGTLLITRVTPEDSGNYTC
MPTNGLLTPPTASASLTVRHRAQALLMPQQTYLPTGLGGLVSCPVRAQPPLLRVDWTKDG
QPLNLAMYPGWTLTSEGSVFMATVNDDATGVYTCTPYNSFGTMGQSGPTTVILQDPPSLN
VSPRKEYREEVGRKLVIPCQTTGEPAPTVTWSKVGPATLSQYSIAANGSLLLFPLSKDHQ
GEWECSVTNLVATVKASTLISVLGTSPHAATLVSVSPGFKQANVSWEPGFDGGYPQTFTV
WLKQMSAGDSGVKQEWLSVPVLSSSGSSLQVTGLVPDTEYQFSVLPHNKVGTGPFSEIAT
IRTLNPLPRRAKLEPPTSLSANKSSAGIVLQWSPVAQFPPITGFVLQSRSEQGEWLNLDE
DISANRSVMIIPGLRKDSVYELRLLSRRGELLSEPSPSVNVSNMGMDMYPASSRLLEFVP
EPLLAGVMGGVAFLCLALILVVGTVCIISHKRDQRRRKKKDDLPPAIYKSPSSNGSLANS
PDSVLKQKLLHSHYPGSTSPSCSSSQSDHSSFGRPSRGEYQDQCQQLLSCRPPPPHYAPH
HHHHLPRTGSSPTSPLELISRGPDSLFMMQPYDQASIHISHNMRSLRKDFPQSTGVQRSV
SLRSEKSVRREPPFVLSVDLPPCGGSNPNPTTRVRAMAKHLSLHGRFYLDGEQDSFAGHP
GKSSPYSDSNSDMYPQTSLEESNPGYTSLKRAVQPATASTLVLQMEHERETGNMSRCLKL
AREREELERKLRKYTLERNATLDGKSERPGRDEESCRETEECDPIWKPQESTSPQNHPHH
CDPQANLGSSSMAKGPLSPSYIHWEASPLTSATSLVAAHHTPSERTATLHCDRPVTQCPF
LSPVTQHPLRDKRAEGHSKRRVSHQPLERQEGKEAARVKTHTGLCDATHMSTEMKGDDSE
SHEWNSKSNQCHSKSKPDVSVNKVPGSWKVELARSQPFEKPSQHTLVDLLDCIEMSVDEP
EDEGSVDPPTNPIMLQRHDLLAEKDHRRPQTTKEVRRGHPLDHRKSPVSREEREKWHRRS
PWGRSPATIQPPRPVLRKALSLGGSQNGDDRHHQRSHSLDSRRQSQVNFLTPDAWVDSLS
QENCSSPFSIRPDSVFWEPEFTSAPETNHTEAPPACPPPPPPPQDPQPPSRAPQQLYEAY
KGNMHIPKVRKLVLERQQPLPPTPPPVPSGPIHHPHNPRKKASIFPDASRWPITYQEALR
SVQRMEARKNASLPRDHREHCRGRTTAPSLVRGYSWPAPLHTSQPPQEEEKQEVVEEEEE
EEEEEEEEEGEERYGGHETEVEIGRYHRGVPDSGGSYSSYTSQSSGRGSLEPPNGRLSIC
LSPTLTSSPETIEEIQGNTEETRLQDMEALKRRKASVDENYEWDSTDVSIQPGDQDLEGR
SLFSSVSLLKSTPSMHHSRKGLKESVQFQGHHHVTSRYSDPEPETVLF
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaagagggactatttcctggatgtcaccatagtgactgcactctgcctgctg
tgtgtcagccatggtcagcagccagaggtgcgtgccaaggaagggggtgtggtggagatg
gtgtgtagactgccacccactgacacgggtgcgtctgcatcattacacgtggtagaatgg
gtgcgccagggctttgacatcccagtcctgatcaagtttggagtgtatgctcctcgggtg
catcccaactacgagggccgtgtctctctggtcaggaacactgttctgagagtgaagggg
ctcctcatggaggaccagggcctgtacgagtgtcgcattctcctgctggacaaaaccatg
gacgagacccacaacggcacctggaccctactctctgtgactgctcctcctattttcacc
aagacccctccccctgtcctggaggctctagtggggaatcctctttctctagcctgtgtt
gctcgtggcaacccacaacccaccataacctgggctaaagatggtactctgattggagga
gacaaggttgaggtgctgagtgggacgttgtctctcagagcagtgagcacagaggccgga
ggacggtatgaatgtctcgccaccaacacagagggcaatgtgactcatgtgacaaagctg
aaagtcaaaggtcctccagtcattgttatccccccgaagaacacggctctcaacctgacc
cagaatgccctcctgcggtgccaggccgtggctgatccgcccaacatgacctatgtgtgg
caaaggcagggagagaatgtccatcacatagaggctctgaagtcccgtgtgaagatcatg
gtggacggcaccctccttatcacccgcgtcaccccagaagattctgggaactatacctgc
atgcccaccaatgggcttttaactccgcctactgcatccgccagtctcactgtgagacac
cgtgcccaggctctcctgatgcctcagcagacatatctccccacaggcctggggggactg
gtctcctgccctgtgagagcccagccccccctgctccgtgttgattggaccaaggatgga
cagccactgaatctggccatgtacccaggatggacgttgacgtctgaaggctcggtgttc
atggcaactgtcaatgatgatgcaacaggcgtgtacacgtgcaccccctacaacagcttc
gggaccatgggtcaatcagggcccacgacagtcatcctacaggaccccccgtcactcaac
gtgtccccccgaaaggagtatcgagaggaggtggggaggaagcttgttatcccctgccag
accactggagagccagcccctactgtaacctggagcaaggttggacctgccacactctct
cagtactctatagcagccaacggctccctgctgctgtttcctctcagtaaagaccaccag
ggggagtgggagtgcagcgttaccaacctcgtggccactgtcaaagccagcactctcatc
tcagtgctgggcaccagtccccatgctgccaccctggtgtctgtgtctccagggttcaag
caggccaatgtgtcctgggaaccaggctttgatgggggatacccccagacattcactgtc
tggttgaagcagatgtcggcgggtgacagtggggtgaaacaggagtggctctctgtgccc
gtgctctcctcctctggctccagtctgcaggtgacagggctggtccctgacacagagtac
cagttcagtgtcctgccacacaacaaagtgggcactgggcctttcagtgagatcgccacc
atccgaactctgaatccactcccaaggagagcgaaactagagccgcccacatcattgtca
gccaataagagctcggcaggtatagtcctgcaatggtctcctgtggctcagttcccgccc
atcactggatttgtcctccaatcgcgctccgagcaaggggagtggttaaatctagacgag
gacatcagtgccaatagaagtgtgatgatcattccaggtctgcgcaaggactctgtgtac
gagctgcggctgctgtcccggcgaggggagttgctgagcgagcctagtccatcagttaac
gtctccaacatggggatggatatgtaccctgccagttcccgcctcctggagtttgtaccc
gaaccgctattggctggagtgatgggaggcgtcgccttcctgtgtttggccctcatcctg
gtcgtagggacagtgtgtatcatcagtcacaagagagaccagcgacgcaggaagaagaaa
gatgatctccctcctgccatctataaaagcccctcctcaaacgggtcccttgctaacagt
ccagacagtgtgctgaagcagaagctcctccattcccactatcctggctccacctccccc
tcctgctcctcctcccagtcggaccactcctctttcggcagacccagccgcggtgagtac
caggaccagtgccagcagctgctctcctgccgcccacctcctcctcactacgccccccac
caccaccaccacctccccaggacaggctcttctcccacttcccctctagagttaatctcc
agaggccctgacagtctcttcatgatgcagccctacgaccaggcctccatccacatttcc
cacaacatgagatccctgaggaaagacttcccacaatccacaggggtccagaggtcagtg
tcccttcgctctgagaagagtgtgaggagggagccgccgtttgttctctcagtggaccta
cccccctgtggtggatctaaccccaaccccacgaccagggtccgggccatggccaaacac
ctttccctccatggacgattctatctggatggggagcaggacagttttgctggacatcca
ggcaagagtagtccctactcagacagtaactcagacatgtacccccagacaagcctggag
gagagcaacccaggatacacgtcactaaagcgggccgtccagcccgctaccgccagcacc
ctggtgctacagatggagcatgagagggagacgggcaacatgagcaggtgtctgaagctg
gcccgggagagagaggagctggagagaaagctacggaagtacacgctggagaggaacgct
actttagatgggaagagcgagagaccaggcagagatgaggagagctgtagagagactgaa
gaatgcgatcccatatggaaacctcaggaaagcacctctccacaaaatcacccccatcac
tgtgacccccaggccaacttggggagctctagcatggccaaagggcctttgtccccatct
tatattcactgggaggccagccctctcacctcagccaccagcctggtcgcagcccatcac
accccctctgagaggacagcgaccctccactgtgaccgtccagtcactcaatgtcccttt
ctgtcacctgtcacacaacaccccctcagggataagcgagcagagggtcactctaagagg
agggtgagtcaccagccactagagaggcaagaagggaaagaagctgcgagggtcaagaca
cacacagggctttgtgatgctactcacatgtcaacagagatgaagggagatgactcagag
tcacatgaatggaacagcaagagtaatcaatgccattccaagtctaaaccagatgtatct
gtcaacaaagtgcctggttcatggaaagtggagttagcaaggtcacagccatttgaaaag
ccatctcaacacacattggtggatctcttagactgtatagagatgagcgtggatgaacca
gaggatgaaggctcagtggatcctcctaccaatcccataatgctccagagacatgaccta
ttggccgagaaagaccacagaagaccgcaaaccacaaaagaagtccgcagaggccatcca
ttggaccacagaaagagcccagtgtctagagaggagcgggagaagtggcacaggaggtca
ccttggggcagaagcccagctaccattcagcctcccaggccggtgctcaggaaggccctc
agtctaggaggctctcagaacggggatgaccgccaccaccagcgcagccacagtctagac
tccaggagacaatcccaggttaacttcctgacgcctgatgcctgggtagactctctcagc
caggagaactgctcctctcctttctccatccggccagactctgtgttctgggaaccggaa
ttcacctcagctcctgagaccaaccacacagaggccccccctgcctgccctcctccccct
cctcccccccaggacccccagcctcccagcagggccccacagcagctttatgaagcatac
aagggtaatatgcacatcccaaaagtaagaaaactggtgctggagagacagcagccgctc
cccccaacccctcctccagtgccttcgggccccatccaccacccccacaacccccgcaaa
aaggcctccatcttcccagacgcctccaggtggcccatcacctaccaggaggccctgagg
tccgtgcagcgcatggaggccaggaagaatgcctctctccccagggaccacagggagcac
tgtagaggcagaactacagctccctccctggtcaggggttacagctggcctgcacccctt
cacacctctcagccaccccaggaggaggagaagcaggaggtggtagaagaggaggaggag
gaagaggaggaggaggaggaggaggaaggagaggagaggtatggggggcatgagacagag
gtggagattgggaggtatcatcggggagtgccagactcaggggggagctacagtagctat
accagccagagcagtggcagggggagtctggagcctcccaatgggcgcctgtccatctgc
ctgtccccaaccctcaccagctctcctgagaccatcgaggagatacaggggaacacagag
gagacacgcctacaggacatggaggcattgaaaaggagaaaggcctcagtggatgagaac
tatgagtgggattcaactgatgtgtccattcagccaggagaccaagaccttgaaggcaga
agcctgttctcctcagtgagtctactgaagtctactcccagcatgcaccattccaggaag
ggcctcaaagagtcagtccaattccagggtcatcaccatgtgaccagccgctactcagac
cccgagccagagactgtgctgttctga
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integrated database retrieval system