Coregonus clupeaformis (lake whitefish): 121541734
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Entry
121541734 CDS
T08357
Name
(RefSeq) alpha-1A adrenergic receptor-like
KO
K04135
adrenergic receptor alpha-1A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
cclu04082
Neuroactive ligand signaling
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121541734
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121541734
04082 Neuroactive ligand signaling
121541734
04081 Hormone signaling
121541734
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121541734
04270 Vascular smooth muscle contraction
121541734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121541734
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Biogenic amine
Adrenaline
121541734
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srv
7tm_4
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
121541734
NCBI-ProteinID:
XP_041706940
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Position
27:30489667..30493020
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AA seq
490 aa
AA seq
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MVPSGENITFPVSENCPNCSSSSYPDMDNTKAVTLGLVLGVFVIFGVLGNILVILSVVCH
RHLRSVTHYFIANLAAADLLLSSTVLPFSATSEVLGRWVFGRPFCSAWAALDVLCCTASI
LSLCVISVDRYLAVSYPLRYPSIATGRRGMVAVTALWGLSAAISVGPLFGWKEPDPEDET
ECRITEEPGYAIFSAMGSFYVPLAVILAMYCRVYVVAKRKTQDLREGRKREGGMDTEGEG
VTLRIHRGNAPAVPEGQEEEGDEGTIRRRRTTFALMRLLKFSREKKAAKTLGIVVGCFVL
CWLPFFLVMPIGSIFPSYRPSDTIFKITFWLGYLNSCINPIIYPCFSQEFKRAFLNVLHG
RCLRQGGRSSKSLGFASSYDPSPGPLSLIRSQPPPSSSSSSTQPPQAPSPASPSLGCCRT
FSGSSSSVGVPGHTHIARVHSKSLLKAWCFAAGERLPPLGAPSLSPSARGAATCQAKVHR
LSLGAKGEAV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggttccctcgggtgagaacataactttcccagtgtcagagaactgtcccaactgcagc
tcctcctcctaccctgatatggataacactaaggctgtgaccctgggtctggtgctggga
gtgtttgtcatcttcggggttctgggtaacatcctagtcattctgtctgtcgtgtgccac
cgccacctgcgctccgtcacacactacttcatcgccaacctggcagcggccgacctgctc
ctgagctccaccgtgctgccgttctctgccacctcggaggtcctgggccgctgggtgttt
ggccggcctttctgtagtgcttgggccgccttggatgttctctgctgcacggcctctatc
ctcagcctgtgtgtcatctctgtggaccgctaccttgccgtcagctacccgctgcgctac
ccgtccatagccactgggcggcgcggcatggtcgcagtgacagctctctggggcctctca
gcagccatatcagtgggtccgctcttcggctggaaggagcccgacccagaggacgagact
gagtgccggatcacagaggaaccgggttatgctattttctctgccatggggtcgttctat
gtgccactggctgtcatcctggccatgtactgcagggtgtatgtggtggccaagcggaag
actcaggacctgagggagggcaggaagagggagggggggatggacacggagggagaggga
gtgacactgaggatccatcggggaaatgcccctgctgtgccagagggacaggaggaggag
ggagatgagggcaccattaggcggagacgcaccaccttcgccctcatgcgcctgctgaag
ttctcccgggagaagaaggcagccaagactctgggcatcgtggttggctgcttcgttctc
tgctggctgcccttcttcctggttatgcccatcggctccatattcccatcatacaggcca
tctgacaccatctttaagatcaccttctggctgggctacctcaacagctgtatcaaccct
attatctatccctgcttcagccaggagttcaagagggccttcctcaacgttctgcacgga
cgctgtctcagacaggggggcaggagctccaagtctctggggtttgcttcttcctatgat
cccagtcctggtccattgtctcttatcagatcccagcctcccccctcctcctccagctcc
tccacccagccaccccaagccccctccccagcttctccctccttgggctgctgtaggacc
ttctctggctcctcttcctcagtgggggtgccaggtcatacccacattgcccgggtccac
agtaaaagcctgctgaaggcgtggtgctttgcagcgggggaaagactgccaccattgggt
gctcctagcctaagcccctcagcccgtggtgctgctacatgtcaagccaaagtccatcgc
ctctccttgggagcgaaaggggaggcagtgtga
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