Coregonus clupeaformis (lake whitefish): 121541795
Help
Entry
121541795 CDS
T08357
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121541795
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121541795
Surveillance factors
Other surveillance factors
121541795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
TAFH
Motif
Other DBs
NCBI-GeneID:
121541795
NCBI-ProteinID:
XP_041707031
LinkDB
All DBs
Position
27:32024880..32059938
Genome browser
AA seq
1050 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGRSVTSPPPSPAMPKSKLADYRYGRE
EMLALYIKDDKPPEDIMQDKEFAAILQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLM
GKGGGAAPAGVAKGRGGGIRGGRGRGEGAFYQRAPGGPDDGEVGFGRGREMLRSQSWDDR
ADRPRFEKLIRRAEVVRPGFEEAGPLGRKDSWRADSDNWRTLREEEEEAAGGVGEQPAWR
VAGARSDDGGPRSAGWRDHGGRRKFEFDFRDGEGPRREDDRDGLPEWCTDEEDGEMGTFD
SSGAFMCIKKGSKDTITEEDLEFEALEEDEENGQEDKDNYKDNYTDRDKCEAAREEVDKY
RTPSPPAVSAPPSSDPLPAPCAPEAPQAPISHPSKTNHVPTEGSSPPGSGAQLSPDPCSS
TTTTSSLMPPPSFGSLLPSTGGEVEEDEGMKHLQQEAEKMVASLQDTSLEEESFTQALQE
SHNISSHSHTHPAPRSHTRTAGHTHSHLVHRDCALPLSHEAAMKWFYKDPQAEIQGPFST
VEMCEWFQAGYFSMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPPLLVRQPPPPRG
SSSNMDQELLKKQLEQAATAALYQQLQIRFQHMNRSGDSSMIPSMNRSMSVPDNGSMWDM
RTSASQQSGGEANLWDLTMSHSTQGPSLEQLQKLQERREVELRAKREEEERKRREEKRRQ
QEEQKRREEEELYRRKQQCRQQQELIMKLLQQAQPGGPGCVSGSGSGWSGPQASVLSKQG
KSLSMLELETERLLKQQAQHQKAQQQRDRHGGLSMGQWGEGSVGMWSGGGMEPKGSSGGM
GVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMKPQDGFTTW
CEQMLHALNTSANNSPSSSLDVTTIVAYLKEVESPYEVHDFIRSYLGDTVEAKEFAKQFL
ERRAKQKANHQRQQQQLSKEVAGLSVNNFPVQSMFQAAQMGTGGMYDSQAAKMKKKQTMM
LHSDPSILGYSFLGAGDRMSLGEMETVEDY
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacctaaacttgaggctccgtgcactatccagagggcggagtgtgacgtcc
ccccctccctctccagcaatgccaaagtccaagctggccgattaccgctatggccgcgag
gagatgctagcactttatatcaaagatgacaagcccccagaggatatcatgcaggataag
gagtttgctgctatcctgcaagatgagcctgtgcagcctttggccctggagcctctaact
gaggaggagcagagaaacttctccatgtctgtgaacagtgtggctgtgctgaggctgatg
ggaaagggaggcggggccgcccctgcaggtgtggccaagggtcgtggaggaggcatcaga
ggagggagaggaagaggtgaaggtgcattctaccaaagagctcctggaggtcctgatgat
ggagaggtgggcttcggtcgtggccgagaaatgctccgcagccaaagctgggatgaccga
gctgataggcccaggtttgagaagctaatcaggcgtgctgaagtagtgcgtccagggttt
gaggaggcggggcctcttggcaggaaggactcctggcgtgccgacagcgacaactggcgt
acgctccgagaggaggaggaagaggcagcaggaggagtgggagagcagccagcctggaga
gttgcaggagcccgcagtgatgatgggggtcctcggtctgcaggctggcgtgatcatggc
ggccggaggaagtttgagtttgacttccgtgatggcgagggcccacgcagggaggacgac
agggacggccttcctgagtggtgcaccgatgaggaggatggagagatgggcacctttgac
tcctctggggccttcatgtgcatcaagaaaggctccaaggacaccatcactgaagaggat
ctggagtttgaagctctagaggaagatgaggagaatggtcaggaagacaaggacaactat
aaggataactacactgacagagataagtgtgaagcagcacgtgaggaggtggacaagtac
aggactccttctcctcctgctgtctctgcccctccctcctcagaccctctccctgcaccc
tgtgccccagaggctccccaggcacccatctcccacccctccaaaaccaaccacgtgccc
actgaaggcagctcacctccagggagtggtgctcagctcagtccagacccctgctcctcc
accaccaccacctccagcctgatgcctcctccctccttcggatctctcctcccatcaaca
gggggagaagtggaggaggacgagggcatgaagcacctgcaacaggaggctgaaaagatg
gtggcatctctgcaggacacatcccttgaggaggagagtttcactcaagcactgcaggag
agccacaacatctcctcccactctcacacacacccagccccacgctcacacacacgcacc
gctggacacacacactcccacttggtccatagggactgtgccctgccactctcccacgag
gcagccatgaagtggttctacaaggacccccaggcagaaatccaaggtcccttctccacg
gtagagatgtgcgaatggttccaggcaggatacttctcaatgaccctgctggtaaagagg
ggttgtgatgagggcttccagcccctgggtgacgtcatcaagatgtgggggcgtgtgcca
ttctcccctggcccgtcccccccgcccctgctggtgagacagcccccaccacctcggggg
tcctctagcaatatggatcaggagctgctgaagaaacagttagagcaggcagccactgca
gctctataccagcaactgcagataaggttccagcacatgaacaggagtggggattctagc
atgataccctcgatgaacaggtcaatgtcagtaccagataatgggtctatgtgggacatg
cgtacctcagcctcccagcagtcaggcggtgaggccaacctatgggacttaaccatgagt
cattccactcaggggccatccctggagcagctacagaagctccaggaacggcgtgaggtt
gagctcagggccaagcgagaggaggaggagaggaagcggcgggaggagaagaggaggcag
caagaggagcagaagaggcgtgaggaggaggagctgtacaggcgtaagcagcagtgtcgg
cagcagcaggagctgatcatgaagctgctgcagcaggcccagcccgggggcccagggtgt
gtctctggatcggggtctgggtggagcggcccccaggcatcagtcctctccaagcaaggc
aagagcctcagcatgctggaactggagaccgagaggctgctcaaacagcaggcacagcac
cagaaggcccagcagcagagagaccggcatggaggcctgtctatgggtcaatggggtgag
gggtctgtgggcatgtggtctggtgggggcatggagcccaaaggcagctctggagggatg
ggtgtctgggaggaggctgtgaagaaccagaacagcctccgcaacatgggcatgaagaac
agccgcagcagcccctctcttagcgagcagtacatgttgaggaagaagcgtacagaggag
gaggacaaactgctgaagctgctgcagggcatgaagccccaggacggcttcaccacctgg
tgtgaacagatgctgcacgcgctcaacacctccgctaacaactccccctcctcctccctg
gatgtgaccaccatcgtggcctatctgaaggaggtggagtctccctacgaagtccatgac
tttatccgctcctacctgggcgacactgtggaagccaaagagttcgccaagcagttcctg
gagcgccgtgccaaacagaaagcaaaccaccagagacagcaacagcagctgtcaaaagaa
gttgcagggctgtccgtgaacaactttcctgtacagtccatgttccaggcagcccagatg
gggacaggaggaatgtatgatagccaggctgcaaagatgaagaagaaacagaccatgatg
cttcactccgaccccagcatcttgggatattcattcctgggcgcaggagacaggatgagc
ctgggagagatggaaacagtggaggattattga
DBGET
integrated database retrieval system
