Coregonus clupeaformis (lake whitefish): 121541808
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Entry
121541808 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4-like
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121541808
04082 Neuroactive ligand signaling
121541808
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121541808
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121541808
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121541808
NCBI-ProteinID:
XP_041707049
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Position
27:complement(32433845..32481810)
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AA seq
512 aa
AA seq
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MLGPQEDKLCGIFSALAALSFVCFAQSTSTGQTGISVAKATVDKLLKGYDIRLRPDFGGA
PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYAELPLNLTLDNRVADQLWLP
DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIVFYWHGGDTAVTGVDKLELPQFSIVALRLVSREVRFTTGSYPRLSLSFRI
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK
IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKIHERLNKTNNERSRYEEK
RLREQDSIATPFQTNTLRSYTQRRNLYLEEQRKVGVDAYGNILLTTLEMNNEVMPSDVGS
SVSDSRNSVMSFDSSGVQFRKPMAPRDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPN
LADVSTIDKWSRVLFPIMFGFFNLIYWLYYVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcctcaagaagataaattatgtggaattttctctgctttggcggctctgtcc
ttcgtttgctttgctcaaagcacctccactggacaaactggaatatctgtggccaaggcc
accgtggacaagttgctgaaggggtatgacatccgtttaaggcctgattttggaggtgcc
ccagtcatcgtaggaatgagcatcaacatcgctagcattgactccatctcagaagtgaac
atggattacaccatcacaatgtatttccagcaaagttggcgagacaagcggttggcatac
gctgagctgcccctcaacctgactctggataaccgcgtggcggaccagctgtggctccca
gacacctacttccttaacgacaagaagtccttcctgcatggtgtgacagtaaagaaccgt
atgattcgactgcatcctgatggcactgtgttatatggactcagaataaccaccacagca
gcttgcatgatggacttgaggaggtacccgctcgacgaacagaactgcaccctggaaatc
gaaagctatgggtacaccacagacgacattgtgttctactggcatggaggggacactgcg
gtgacgggggtggacaagctggagcttcctcagttctccatcgtagcacttcgcctggtg
tccagggaggtcaggttcaccacaggttcctatcccaggctatcattgagtttcaggatt
aaaaggaacataggctacttcatcctgcagacatacatgccctccatcctgatcaccatc
ctctcctgggtctccttctggatcaactacgatgcctctgcagctcgggtggccctgggt
gttacaacggtgctcaccatgacaaccattaacacccaccttagggagaccctcccaaag
atcccgtacgtgaaagccatcgacgtctacctcatgggctgttttgtgtttgtgttcctg
gccctgctcgaatatgccttcgtaaattatgtgttctttggccggggcccccagcaacag
aagaaaatccacgagcggctgaacaaaaccaataacgagcgctcgcgatacgaagagaag
cgcctgagggaacaggactccattgccacgccgtttcaaaccaacaccctcaggtcatat
acacagagaagaaatctgtacctcgaggagcaaagaaaagttggggtggacgcttacggg
aacatcctgctcaccacgctggagatgaataatgaggtgatgccgtcagacgtgggaagt
agtgtcagtgactcccggaattcagtgatgtcattcgacagctctggggtccagttcagg
aagcccatggctccccgcgatggcttcagtcaccactcactggaccgcagcgccatgcgc
agcagggccaactgtcggctacgacggcgctcttccaagctcaagctgaaaatccctaac
ctggcagatgtcagcaccattgacaaatggtcccgggtccttttccccatcatgtttgga
tttttcaacctaatctactggctgtactatgtgaattga
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