Coregonus clupeaformis (lake whitefish): 121541809
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Entry
121541809 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
cclu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121541809
04082 Neuroactive ligand signaling
121541809
04519 Cadherin signaling
121541809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121541809
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121541809
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121541809
NCBI-ProteinID:
XP_041707051
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Position
27
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AA seq
473 aa
AA seq
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MAATLRKLAVFVSGMWICLLLLNPFPQTGAVVGHREPLPDDSRDNITIFTRILDRLLDGY
DNRLRPGLGAESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDTHACPLKFGSYAYTNNEVVYLWTKGDEDSVVVAEDGSRLNQYDLLGHVIGKESMIS
STGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKKEAQE
MRRRESASLSKKANNTFNIVGTTYTINEAKDPGLTTVSRSATTATHHHHSHKVPKMDDNY
VEAIKSYNRVSKVDKISRIIFPVLFFIFNLVYWATYINSKPRAVPPPRSTSQN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactctccggaaacttgcagtattcgtgtcgggcatgtggatctgcctcctg
ctcctcaacccctttccacaaactggggcagtggttgggcacagagagccgttgcctgat
gacagtagagacaacatcactattttcacccggatcctggacagactactggatggctac
gacaaccggcttcgccccggactaggagcagagagtgtgacggaggtgaggacaaatatc
tacgtgaccagctttggaccggtgtcagacacagacatggagtataccatcgatgtgttc
ttccgtcagagctggagggatgagaggctgaagttcgacgggcccatgcaggtcctacct
cttaacaacctcctggccagtaagatctggactccagacaccttcttccacaacgggaag
aaatctgtggcccacaacatgaccactcccaacaaactgttacgactggtggacaacggt
accctgctctacaccatgaggctgaccatccacgctgagtgtcccatgcacttggaggat
ttccccatggatacacacgcctgccctctgaagtttgggagctatgcgtataccaacaat
gaggttgtctatctctggaccaaaggagatgaggactctgtagtcgtagcagaggatggg
tcaagactaaaccagtatgatctactgggccacgttattgggaaagaatctatgatttcc
agcacaggagaatatgtagtgatgacaacgtatttccatttgaaaaggaaaattggctat
tttgtgattcaaacctacctcccgtgcatcatgactgtcatcctgtctcaggtctccttc
tggctcaacagagagtcggttcccgcccgcactgtattcggggtcaccacagttctaacc
atgacaaccctgagtatcagtgccaggaactccctgcctaaggtggcctatgccacagca
atggactggttcatggcggtatgctatgcctttgtcttctctgccctgatagagtttgcc
acagttaactacttcaccaagcgcagttgggcgtgggatggcaagaaagaggcccaggag
atgaggagaagagaatctgcctctctttccaaaaaggccaataacacattcaacattgtt
ggaactacatacaccatcaacgaagcaaaggacccaggtttaaccaccgtctccaggagt
gccaccacagctacacaccaccaccacagccacaaggttcctaaaatggacgacaattac
gtggaagccataaagtcctacaaccgcgtcagcaaagtggacaagatatcacgcatcatc
ttccctgtactgttcttcatcttcaacctggtctactgggccacgtacatcaacagcaag
ccgcgcgccgtcccccctcccaggtccacctcccagaattaa
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