Coregonus clupeaformis (lake whitefish): 121541871
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Entry
121541871 CDS
T08357
Name
(RefSeq) polycomb group RING finger protein 3-like
KO
K11488
polycomb group RING finger protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121541871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121541871
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
121541871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
DUF3337
zf-RING_4
zf-Nse
TRAF3_RING
GAGA
zf-RING_10
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
121541871
NCBI-ProteinID:
XP_041707155
LinkDB
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Position
3:complement(7874268..7910413)
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AA seq
249 aa
AA seq
DB search
MAALGNPEMLTRKIKLWDINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLEENNTC
PTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEIKKQRDFYQKLGMEVPGDIKGEL
CSMKHLDPQRNGEVKTEDTDKKETSEEKPEEDNDYHRSDEQVSICLECNSSKLRDLKRKW
IRCSAQATVLHLKKFIAKKLNLTSFNELDILCNEEILGKDHTLKFVVVTRWRFKKSPLLL
HYRPKMDLL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattagggaacccagagatgctaaccaggaagatcaagttgtgggacatcaac
gcccacatcacttgtcgcctgtgtgaggggtacctgatagatgccactactgtcacggag
tgcttacacaccttctgcagaagctgtctagtgaagtacctggaggagaacaacacctgt
cccacatgcaggattgtcattcaccagagccatccactgcagtacattggccatgaccga
acaatgcaagacattgtctacaagttggtgccggggttacaagaggcggagataaaaaaa
caaagagacttctatcagaagctgggaatggaagtgcccggggacatcaaaggagagctg
tgcagcatgaaacatctagatcctcaacgcaatggcgaggtgaaaacagaggacacagac
aaaaaggaaacgtcggaggagaaaccggaggaggataacgattatcaccgcagcgacgag
caggtcagcatctgtttggagtgcaacagcagcaagctccgcgacctgaagcgcaagtgg
atccgctgctcggcgcaagccacggtccttcacctcaagaaattcatcgccaaaaagctt
aacctgacatcatttaatgagctggacattttatgcaatgaggaaatcttggggaaggac
cacactttgaaatttgttgtcgtgacgagatggagatttaagaaatcccccctcctgctg
cattacaggcccaaaatggatttgctgtag
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