Coregonus clupeaformis (lake whitefish): 121541874
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Entry
121541874 CDS
T08357
Name
(RefSeq) latent-transforming growth factor beta-binding protein 3-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121541874
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
121541874
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
Gigasin_N
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
121541874
NCBI-ProteinID:
XP_041707159
LinkDB
All DBs
Position
27:complement(34313586..34366434)
Genome browser
AA seq
1266 aa
AA seq
DB search
MPSLIISHLLVIWVAVQRLAWCAERASTRERFKVVIAPLICKRICLKGQCQDTCEQGNNT
TLIGENGQSADTLTGPGFRVVVCPLTCMNGGVCSSRTHCLCPPGFTGRLCQFPLRQMPEA
QAARGNKQPVYTLSVLPDGQSQGEQAAMGRPQLAQTHSVFTLPLAQGAGHHSSEVQFNVR
VHHTHDTSVVIRPLDQSNSKPPHKTVTRLTPQTHKPRGRCFQETTPKQACSSTPLPVLTN
QEDCCGSVGNSWGQNKCYKCPKLPYAGVKLQTIIEDYGSTCPLGYKRLNSTHCQDINECT
MQGVCQKGECLNTQGSFLCACKPGFTLDRTRCVDSPSPVEQAQCFLMATEAGRCEHALPT
HLSQEMCCCTVGKAWGSSCERCPQDGTASFNKICPAGKGYFLHSVRETVAFPPQIHTSLE
QEHKQEVKPPEGPPETTTPMQLSTRGPRGPEIITKPTPPPIIRVNPDSGPLEVAQTQVSP
ETDECRLSRNLCGHGECVNVHTGYKCECYAGYRLHPQRNACVDDDECDAEPCGHGRGICI
NTEGSYRCRCLHGYKLLVYHGKLRCIDVNECSKPDICGQGGQCVNLPGSYKCDCHKGFRS
KSQRQPACEDINECLDPSSCPNEQCENTPGSYECIPCLPGHQAQGGVCYDVNECQKRGVC
PNGRCENLPGTYRCLCNEGFLPAADSKGCRDIDECEDDRLCANGRCVNTEGSFQCHCYPG
YQRTQEGSHCEDINECERPSNCQRGRCINSMGSYRCECQKGYMLVGGRRCQDIDECVADW
GLCQPHGVCENRQGSYVCVCKDGFILSEDKQSCEEIEVDVEDKKECYLNLDDTVFCDSVL
ATNVTKQECCCSIGVGWGDHCEIYPCPVYHSSEFHSLCPVGRGFYHEEGVTEYGLSVHRD
IDECVLFSNEICKEGRCMNTQPGYECYCQQGFYYDSNLLECIDVNECHDESLCTNGQCKN
TRGSFYCTCNSPWTPDASKKKCVIPTVAGVDECQDPLNCKSGHCVDTPGSYYCICSTPWI
LATDRNSCVTPEEQADINECQDPSYCKNGRCVNTPGSFHCICTQPLTFSAALKQCVYDDR
TAAHKDVCFLQVDEDLICSQPRNGLVFTYSECCCHYGRGWGPECRTCPQRNSVIFNRLCD
MHLETESDGEGDFLAAFANYNPGIEGDSSEEDSDECSCANGRCVRSYLSTMCDCNTGFRL
DHSRTRCTDIDECAEPGVRVNPCKNARCVNTIGSFKCYCKNGFVPARRPNMCVPGTKAQN
VRTRAL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctgatcatttcccatctgctcgtcatctgggtggctgtccagaggctggcc
tggtgcgcagagcgcgcatccacccgggagcgcttcaaagtggtcatcgcccctctcatc
tgcaagaggatttgtttgaaaggccagtgccaggacacctgtgagcagggcaacaatacc
acactgataggcgagaacggacagtcagcggatactctcacaggtcctggattcagagtg
gttgtgtgtccactgacctgtatgaatggaggggtgtgcagctcgcggacccactgcctg
tgcccgccaggtttcactgggcggctgtgccagttcccgctacggcagatgcccgaggcc
caggcggcgcggggcaacaagcaacccgtctacacgctgtcagtgctgccagacggccag
agccagggagagcaggcggccatggggcgaccacagctggcacagacccactctgtgttc
acccttcccctggcacagggggcaggacaccactcatcagaagtgcagttcaatgtgcgt
gtccaccatacacatgacacatccgttgtcatccgtcctctcgaccaatcgaattccaag
ccccctcataaaactgtgacacgcttgacccctcagacgcacaaacccagggggcggtgc
ttccaggagaccacgcccaaacaagcttgtagcagtacccctcttcctgtactgaccaac
caggaggactgctgtggaagtgtggggaactcctggggacaaaacaaatgttataaatgt
cccaagctaccgtatgctggagtgaagctgcagaccatcatagaggactatggttccacc
tgccctctgggctacaagagactcaacagcacccactgtcaagacatcaacgagtgcacc
atgcagggggtgtgtcagaaaggggagtgcctgaacacccagggtagtttcctgtgtgcc
tgtaagcctggcttcaccctggacaggaccagatgtgtggactctccatctccagtggag
caggctcagtgtttcctcatggcaacagaggcgggtcgctgtgagcatgccctacccacg
cacctgtcccaggagatgtgctgctgcaccgtgggcaaggcctggggctccagctgtgag
aggtgtccccaagacggcacagcctccttcaacaagatctgtccagcagggaagggctac
ttcctccatagtgtccgggagacagtggcgttccctcctcagatccacaccagcctggag
caggagcacaagcaggaagtcaagcccccggaggggcctccagagacaactacacctatg
cagctgtccacccgcggccctcgcggccctgagatcatcaccaagcctacccctccgccc
atcatcagggtgaacccagacagtggccccctggaggtggcacagacgcaggtctcacca
gagacagacgagtgcaggttgagcaggaacctctgtggccatggggagtgtgtcaatgtg
cacactggttacaagtgtgaatgctacgctggctaccggctccaccctcagaggaacgcc
tgtgtggatgatgatgagtgtgatgctgagccatgtggccatggaagaggcatctgcatc
aacacagaaggctcctaccgctgccgctgtctccatggctacaagctcctggtgtatcat
gggaaactcagatgtatagatgtgaatgaatgctccaagccggacatctgtgggcagggg
ggtcagtgtgttaacctgccagggtcctacaagtgtgattgtcacaaaggcttcaggagc
aagtcccaacgccagccagcctgtgaagatataaatgagtgtctggaccccagcagctgt
cccaatgagcagtgtgagaacaccccaggatcctatgagtgtataccctgcttacctggt
caccaggcccagggtggggtctgttacgatgtcaatgaatgccagaagcgtggggtgtgt
cccaacgggcgctgtgagaacctcccaggaacataccgctgcctctgtaacgaaggcttc
ctcccagctgcagacagcaaaggctgcagagacattgacgagtgtgaggatgacagactg
tgtgccaacgggcgctgtgtcaacacagagggctccttccagtgtcattgctacccagga
taccagcgcactcaggagggcagccattgtgaagatataaatgaatgtgagcgtccctct
aactgccagagggggcgctgtatcaacagcatgggctcctaccgctgtgaatgtcagaag
ggctacatgcttgtcggagggaggcggtgccaagacatagatgagtgtgtggcagactgg
ggtctgtgccagcctcatggtgtgtgtgagaacagacagggctcctacgtgtgtgtgtgc
aaagacggcttcatcctgtctgaggataagcaaagctgtgaggagattgaggtggatgtg
gaggataagaaggagtgttacctgaacctggatgacacagtgttctgtgacagtgtcctg
gccaccaacgtcaccaagcaggaatgctgctgctccatcggcgtgggctggggggaccac
tgtgagatctacccctgccccgtctaccactcatctgagttccattccctgtgtccagtg
ggccgaggtttctaccatgaggagggagtaactgagtacggcctgtctgtccacagagat
atcgatgagtgtgtgctcttctccaatgagatttgtaaggagggccgctgtatgaacaca
caacctggctatgaatgttactgccaacagggcttctactacgacagcaacctattggag
tgcatcgatgtgaatgagtgccacgatgagtctctgtgtaccaacggtcagtgtaagaac
accagaggctccttctactgcacctgtaactctccctggacccctgatgcttccaagaag
aagtgtgtgatccccactgtggcaggtgtggatgagtgccaggacccattgaactgtaag
agtggccactgtgtggacacccctgggtcttactactgcatctgctctaccccctggatc
ctggccaccgaccgcaacagttgtgtgaccccagaggagcaggctgatatcaatgagtgc
caggacccctcgtactgtaagaatgggaggtgtgtgaacacgcccggctcctttcactgt
atatgtacccagccactcaccttcagcgcagcgctcaaacagtgcgtctatgacgaccgc
acggcggcccataaggacgtgtgtttcctgcaggtggatgaggatctgatctgcagccaa
cccagaaatggcctggtgttcacctactctgagtgctgctgtcactatggccgtggctgg
ggccctgagtgtaggacctgcccccaaagaaactcagtgatctttaaccggctgtgtgac
atgcacttggagacagagtctgatggtgagggagatttcctggcagctttcgccaactac
aacccaggtattgaaggggacagttcagaagaggactcagatgagtgtagttgtgccaat
gggcgttgtgtgcgttcctacttgagcactatgtgtgattgtaacacaggctttaggctg
gaccactcccgcacccgctgcaccgatattgatgagtgtgctgaaccaggggtccgagtt
aatccatgcaagaatgcccgctgtgtcaacaccataggttcattcaagtgctactgcaaa
aatggctttgtccctgcacgaaggcctaacatgtgtgtaccaggcaccaaggcccaaaat
gtccgtaccagggctctataa
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