KEGG   Coregonus clupeaformis (lake whitefish): 121541876
Entry
121541876         CDS       T08357                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121541876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121541876
Spliceosome [BR:cclu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121541876
 Complex B
    121541876
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 121541876
NCBI-ProteinID: XP_041707163
LinkDB
Position
27:complement(34520022..34530473)
AA seq 912 aa
MADKNGKKGKPVGVKRTLTKREQEDLKKKEEEKAAEVFEEFLACFDSNDKSGVKTFVRGG
IVNATKEEEAAEVKKSKLYRPITKFTSVSQNVSPAHSSEIRRPVSIHVNPLLCIQNDTLF
CPLICLPGPQIVKKKTEEKKKSNLELFKEELKQIQEEREERYKRKTKEPGGGYGDLDIPL
MPRSIFDDDPAIPNTTNLYIGCISPKMNEEMLCKEFGKYGPLASVKIMWPRSDEERTRVT
NRGFVAFMTRKDAERALAALDGKMVMGFEMKLGWGKAVRIPPQPLYTPIGVLKMSTPPPP
SGLPFNAQPRDRFRNDFTKPWGRSKEEFDKTLSEAVVKVVIPTERNLLGLIHRMIEFVVR
EGPMFEAVIMSKEKNNPDLRFLFDNKSQEHVYYRWKLYSILQGEPPSEWRTADFRMFRGG
SIWRPPLLNPYLHGDEEAGDEEESPSQEEELKKGQLKTAHRERLETLLRGLTPRREDVGD
AMLFCLERAEAAEEVVGCIAESLSLLQTPLQKKIARLYLVSDILYNSCAKVANASYYRKF
FEAKLPQIFGDISDAYRNIQARLQAEQFKQKIMGCFRAWEDWAVYPESYLIQLQNIFLGL
IKAGEEVIERVEVASPDLDGAPLDGAPLDDLDGSPLAWDPASLDGVPVDDIDGVPLGAPM
DDIDGMPLDDLAHSRVALSKWERVDDADALPQANTESKWDTLGERDLGDDLNASANIKGG
DGESEDDSSDDDSPSKYDSADFKSSLSSFEMSESKRSRLRELEVKVMKFQDELESGKKPR
KSQMNMQKQVEHYRNKLLQKEFDKDDKEKRERSIPKSKDRSKKDERRDKAEESSKARDKE
KSKRSQDRDRGRSRDTEERTQKYRGHSPSKIKSKSPKKSKRSRSPSPVRKTWRRSSSRSP
HRSHKKTKKSKH
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggcagacaaaaatggcaagaaagggaaacctgtaggcgtgaagagaacattgaccaag
agagaacaagaagatctgaagaaaaaggaagaagaaaaagcagctgaagtttttgaagag
tttttagcatgttttgacagtaatgacaaaagtggggtgaagacttttgtccgtgggggt
atcgtcaatgcaactaaagaagaggaagcagcagaggtgaaaaagagcaagctttaccga
ccgatcaccaagtttacttcagtgtcccagaatgtctcaccggcacactcttctgaaatc
agaaggcctgtgagtatccatgtgaatcccttactgtgtatacagaatgatacattattt
tgtccccttatatgtttgcctggtccacagattgttaaaaagaagacagaagagaagaag
aagagcaaccttgaactttttaaagaggagctaaagcaaatacaggaggaacgtgaagaa
aggtacaaaagaaagacaaaagagcctggaggaggatatggagacttggacataccacta
atgccacgatcaatatttgatgatgacccagccataccgaacacaaccaacctgtacatt
ggctgcattagccctaagatgaatgaagaaatgctttgcaaagagtttggcaagtatggt
cccctggcgagtgtgaagatcatgtggccccgtagtgacgaggaacgcaccagggtcaca
aacagaggctttgtggccttcatgaccaggaaagatgcagagagggccttggctgctcta
gacggtaaaatggttatgggttttgaaatgaagctgggatgggggaaagctgttcgcatc
cctccgcagccactctatacacctataggggttcttaaaatgtccacgcccccacccccc
tccggcctgcccttcaacgctcagcccagagaccgcttccgcaatgactttaccaagcca
tggggcaggtccaaggaggagtttgacaagactctgtccgaagctgtagtcaaagtggtt
atcccaacagaaaggaatctgttaggcctcatccacaggatgatagagtttgtggtgcgt
gagggacccatgtttgaagccgtcattatgagcaaagagaagaacaaccctgacttgagg
ttcctttttgacaacaaaagccaagagcatgtgtactaccgctggaaactctactccatt
ctccagggtgagccccccagtgagtggcggacggcagacttccggatgttccgtgggggc
tccatctggaggccgcccctcctaaacccctacctccatggagacgaggaggcgggagac
gaggaggagtctccctcccaggaggaggagctgaagaagggccagctcaagactgcgcac
agagaaagactagagacgctgctgagaggactcacccctcgtagggaggacgttggtgat
gctatgctgttctgtctggagagagcagaggcagcagaggaggtggtggggtgcatcgca
gagtccctgtccctccttcagacaccactacagaaaaagattgccagactgtaccttgta
tccgacatcttgtacaactcctgtgccaaagttgccaatgcatcttattatcgcaaattt
tttgaagcaaaattgccccagatatttggtgacattagtgatgcatatcgaaacatacaa
gcaagactacaagctgaacagttcaagcaaaagataatgggctgtttcagggcctgggaa
gactgggccgtatacccagagtcttacctgatccagctacagaacatcttcctgggtctg
atcaaggcaggagaggaggtgatcgagagggtagaggtggcgtctccagacctggatggg
gcgccgttagacggagctccgcttgacgaccttgacggctcgcccctggcctgggaccct
gcctccctggatggggtgcctgttgatgacatcgacggggttcccctgggtgcacccatg
gacgacattgacggaatgcctttggatgacctggcccactccagagtggctctgtctaaa
tgggagagggtggacgatgctgatgctctcccacaagctaacactgaatccaaatgggac
actttgggagagcgagacttgggggacgacctgaatgcaagtgctaacattaagggagga
gatggggagtccgaggatgacagcagcgatgatgatagcccctctaagtacgacagcgct
gacttcaagagctccctcagcagttttgagatgtcagagagcaagaggagccggctgagg
gagctggaggtgaaggtgatgaagttccaggatgagctggagtctgggaagaagcccagg
aagtcacagatgaacatgcagaaacaggtggagcactacaggaacaagctgctacaaaag
gagttcgataaggatgacaaggagaagagagagagatccattccgaagtcaaaagaccga
tcaaagaaggatgagaggagagacaaggcagaggagagcagtaaagcacgggacaaggag
aagagtaaaagaagtcaagacagggacaggggacggagtagagacacagaggagcggaca
cagaaatacagaggacattctccctcaaaaatcaagtcaaagtctcccaagaagtccaag
cggtcccggtcgccctcgccagtcaggaagacgtggaggaggtctagctcccggtcacca
caccgctcccacaaaaagacaaagaagagcaaacactga

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