Coregonus clupeaformis (lake whitefish): 121541894
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Entry
121541894 CDS
T08357
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03030
DNA replication
cclu03410
Base excision repair
cclu03420
Nucleotide excision repair
cclu03430
Mismatch repair
cclu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121541894
03410 Base excision repair
121541894
03420 Nucleotide excision repair
121541894
03430 Mismatch repair
121541894
03440 Homologous recombination
121541894
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121541894
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121541894
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121541894
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121541894
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
121541894
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
121541894
MMR (mismatch excision repair)
DNA polymerase delta complex
121541894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
CBP_BcsE
Motif
Other DBs
NCBI-GeneID:
121541894
NCBI-ProteinID:
XP_041707201
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Position
27:complement(35403072..35406846)
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AA seq
451 aa
AA seq
DB search
MDYLYLDNIDEFVNDQNKIVTYKWLSLTLGVHVNLAKQMLYHYLDHKRKESSAPLHATYL
VSGKFVENGTTSHKVSVVQEDQLEDVKSKLSLTVSVHVYSVQKAVLKDSGPLYGADYDAV
KENLRNCSRYSAIRCADAVPMSSAEVQQAHEIAQAPPPETEHTKSGINGHSSMSSKPSSK
QPKGIMGMFANKNVSKNQESSKEKTLAQKEDAPVVETSKTKPAAKTHPMSNFFGNQATKK
LDKSIKEEVEAAQMSSSVDEKPSSPAPKAESPVKEELPKGAVVEKDIRSSKTKRLEHSDS
EEEKKKEKKRRRIKKAQPESSDDDVIPDSPPRLQEQRDPSPSPVNQVKKEAVAVSHSDER
SDCKWRKRRRVLKSRTFLDDEGCIVTEKGYESESYSETEDDFKASKPAQKNPTPPKPSTG
KKQEEKRSKKVAAAANKSTKQASIMGFFQKK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggattacctttatttggataatattgatgaatttgtcaacgaccagaataaaatcgtg
acctacaaatggctgagtctcactcttggggtccatgtcaacctagccaaacaaatgcta
tatcattacctggaccacaagaggaaagaaagctcagctccgctccatgctacctacctt
gtgtctggcaagtttgtcgagaatggtaccacgagtcacaaggtgtcagtagtgcaagag
gatcagttggaggatgtgaagtcgaagctgagcctgaccgtcagtgtacacgtgtacagt
gttcagaaggctgtgctgaaagacagtggtcccctgtacggtgcggattatgatgctgtg
aaagagaacctaaggaactgcagcaggtacagtgccattcgctgtgcagatgcagtaccc
atgtcctcagcagaggtgcagcaggctcatgagattgcacaggccccaccaccagagacg
gagcacaccaaatctggcatcaatggtcattctagtatgtcctctaaaccctcctccaag
cagcccaaaggcattatgggaatgtttgcaaacaagaatgtctccaagaatcaagagtct
agcaaagagaaaacattggcgcagaaagaggatgcacctgtggttgagacctccaaaact
aaaccagctgcaaagacacatcctatgagtaacttctttgggaatcaagcaaccaaaaaa
ctggacaaatccatcaaggaagaggtagaagcagcccagatgtcctcttcagtggatgag
aaaccctcaagcccagcccctaaagcagagtctcctgtcaaggaggaactaccaaaaggt
gctgtagttgagaaagatattagaagtagtaagaccaagcgtcttgaacattccgatagt
gaagaggagaagaagaaggagaagaagcgacggaggataaagaaggcccagccagagagt
agtgatgatgacgttataccagattctcctccacggttgcaagaacagagggacccatca
ccaagccctgtgaatcaagtaaagaaagaagctgttgctgtttctcattcagatgagcgt
tcagattgtaagtggaggaagaggagacgcgtcttgaaatcgcgcacctttttggatgac
gagggatgcattgtgactgagaaaggctatgagagtgaatcctactctgagacggaggac
gactttaaggcaagtaaaccagcccagaagaatccaaccccaccaaaaccatcaactggc
aagaaacaggaggagaagagaagtaagaaagttgctgcagctgctaataaatcaactaag
caggcttctattatgggattcttccaaaagaaatga
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