Coregonus clupeaformis (lake whitefish): 121541935
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Entry
121541935 CDS
T08357
Symbol
gtf3aa
Name
(RefSeq) general transcription factor IIIAa isoform X1
KO
K09191
general transcription factor IIIA
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121541935 (gtf3aa)
03021 Transcription machinery [BR:
cclu03021
]
121541935 (gtf3aa)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121541935 (gtf3aa)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
121541935 (gtf3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_ZNF462_1st
Ta0938
Zap1_zf1
zf-met
CHORD
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
121541935
NCBI-ProteinID:
XP_041707264
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All DBs
Position
27:38279323..38286853
Genome browser
AA seq
351 aa
AA seq
DB search
MELSQQVPRKSFICSFPDCHASYNKAWKLDAHICKHTGLKPFVCEHDGCDKSFCDKYHLA
RHQLSHSGERPFRCTVDGCTEAFTANYNLKKHVNRKHNHDEEKLYEYVCSFEGCGKAFRK
NNQLKSHECQQHTKLPPFQLYRCTFEGCEKRFTFPNKLRLHEKVHRGYPCEEDGCSFIGK
TWTEYTKHRRDLHRALFQCNECSKVFRDTWFLKQHQRVHAEERQVFICPREGCQRSFTTP
FNLQSHIGSFHEELRPYTCPHEGCGKTFAMKQSLQRHSVAHDPERKKQKKPHSKRSLVSR
LSGYKPKNNHCAKPHVALQSESIVKGQSEQTNTVGSEPIALLQETVFCNSG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggaattaagtcagcaagtaccgcgcaaaagttttatatgttcattccctgactgtcat
gcatcgtacaacaaagcatggaaactagatgctcatatttgcaagcacacggggctgaaa
ccatttgtgtgtgaacatgacggctgtgacaagtcattctgcgacaagtaccacctagct
cggcaccagctgagccacagtggagagagaccctttagatgtacagtagatggatgcaca
gaggccttcaccgcaaattacaatttgaagaagcatgttaatcgcaaacacaaccatgat
gaggagaaactgtatgaatatgtgtgtagctttgagggatgtgggaaagcgttcaggaag
aacaatcagctcaagtcacatgagtgccagcagcacaccaaactacctccctttcagctt
tatagatgtacctttgagggctgtgagaaacgattcactttccccaataaactacgtctt
cacgagaaggtgcacagaggctatccctgtgaagaagatggctgttctttcattggaaag
acatggactgagtatactaagcataggagagacctacacagagcactttttcagtgtaat
gagtgtagcaaggtgtttcgcgacacctggttcctgaagcagcaccagcgtgtacacgca
gaggagcgccaggtgtttatctgtcccagggaggggtgccagaggtccttcaccacgcca
ttcaacctgcaaagccacatcggctctttccatgaggagctacggccttacacctgcccc
catgaaggctgtggaaagacatttgccatgaagcaaagcttacaacgccacagtgttgcc
cacgatccagaacggaagaaacagaagaaaccccattccaagcgatccctggtttccaga
ctgagtggttacaagcccaagaataaccattgtgcaaagccccatgtagctttgcaatca
gaatccattgtaaagggtcagtcagagcaaacgaacactgttggatcagagcctattgcc
cttcttcaagagacagtcttttgcaactcgggttaa
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