Coregonus clupeaformis (lake whitefish): 121541943
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Entry
121541943 CDS
T08357
Symbol
si:dkey-251i10.3
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121541943 (si:dkey-251i10.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121541943 (si:dkey-251i10.3)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121541943 (si:dkey-251i10.3)
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Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
121541943
NCBI-ProteinID:
XP_041707279
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Position
27:38547748..38561368
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AA seq
799 aa
AA seq
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MAKSKTARKSGETMKMTSSRETVVQGMDDEDEVELHQALADDNISASEDEGGSDDERKHC
KLLEAISSLGGKKRKKLTERSEASIQVSEFTVNAEGEGDKINMSDLIGTLDKTPSALMKM
KKQLKNLQHNQSTLETPLTRKETERIQREVAFEKTSKEVSRWQSVVLQNQKAEQLVFPLN
QEPSGPKRMEQVVAGWKAQTPLEQEIFSLLRMNKQPLHDPVLTPTEEASLRAMSLEEAKI
RRAELQKARVLQSYYEAKAKRERKIKSKKYHRVQKKVMRKEYLKQFDEMVKTDPAAALEE
LKKMELSRMKERMSLKHQNSGKWAKSKAIMAKYDDGARKAMQTQLEVNKDLTQKLVIPAD
EDEEEDEEDSAETLPDFVNDAEPILDQVNPWMRGKLSTEPTVQEESSCIQSPVVGHGEVG
KPGEGQDDQEEDEDQMEETEEDALLRGFEERRKLRQTEDVEVAPMSMVENDDGKKAETGE
ISDDDEEAGLSEFTSLFHGLVKNHVEPPADQPKAAAGVGQGESPALLEEGLVRVRTLEDV
ELLSQDVSANDPAPLITQTPSTEETDPQSATQQTKRKRKRVIDPNEVLTKEAKVIKVPLA
PTAVEDVEDKEEQRVIIKEAFAGDDVISDFLKDKRKQEEAGRPKVIDLTLPGWGEWGGLG
LQPSRSKRKRFRVKVAPPPPRQDQKLPNIIISEKRDSSIAAHQVSQLPFPFENPTQFERT
IRSPVGRTWNTQNTVQKITAPKVVTQLGAIIEPIAREDLIKDNRQAVTGKGPNINLESDQ
GAQKKRRSQQKKKHKHKKN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtcaaaaactgcacgaaagagtggagaaactatgaagatgacaagttcccgt
gagacggtggtccaggggatggatgacgaggatgaagtggagcttcatcaagcactggct
gatgacaatattagtgctagtgaggatgagggaggcagcgatgacgagaggaaacactgc
aaactgctggaggccatcagctcgctcggggggaagaagaggaagaagcttactgaacgg
tctgaagcaagcattcaggtgtcagaattcacagtcaatgcagaaggtgaaggagacaaa
ataaatatgtctgacctcattggaaccttggataagacccccagtgccttaatgaagatg
aaaaagcagctgaagaaccttcaacataaccagagcaccctggagacacccctgaccagg
aaggagacagaaaggatccaaagagaagtggcttttgagaaaacgtcaaaagaggtgtct
cgctggcagagtgtggtcctacagaaccagaaggcggagcagctggtcttcccactgaac
caggagccctctggacccaaacgcatggagcaggtggtagctggatggaaggctcaaacc
cccctagaacaggagatattcagcctcctacgcatgaacaagcagcctctccatgaccct
gtcctgacacccactgaggaggcctctctgagggccatgagtctggaggaggccaagatc
cgtcgtgcagaacttcaaaaagccagagtactacagtcttattatgaagcgaaagccaaa
agggaaagaaaaataaaaagcaagaaataccacagggtacagaagaaagtgatgcgtaag
gagtatctgaaacagtttgatgaaatggttaagacagaccctgctgctgccttggaggaa
ctgaagaagatggaactgtcaagaatgaaggaacgaatgtctctgaagcaccagaacagt
ggcaaatgggccaagtccaaggccatcatggcaaaatatgatgatggggctcgcaaagcc
atgcagacgcagctggaagtgaacaaagatctgacccagaagttggtaatacctgctgac
gaagatgaggaggaggatgaagaggattcagcagagaccttgccagactttgtgaatgac
gcagagcccatactggaccaggtgaatccatggatgagaggcaagctttctacagagcct
acggtgcaggaggaaagcagctgtatacagtctcctgttgttggtcacggagaagtggga
aaaccaggagaaggacaggatgaccaagaggaggatgaggaccagatggaggaaaccgaa
gaagatgcacttttaagagggtttgaggagaggcggaaattgcgtcaaactgaagatgtt
gaggttgcacccatgtctatggtggagaatgacgatgggaagaaagctgagactggagag
atctctgacgatgatgaggaggctgggctctcagagttcaccagcctgttccatgggcta
gtgaagaaccacgtggagcctccagctgaccaacccaaggcagcggcaggtgtaggccag
ggggagagccctgccctgctggaggagggcctggtgcgggttaggaccctggaggatgtg
gagctgctcagtcaggacgtctctgccaatgacccagcacctctaatcacccagactcca
agcacagaggaaacagaccctcagtctgcaactcaacagacaaagagaaagagaaagaga
gtgattgatccaaatgaggttctgaccaaggaggcgaaggtcatcaaagtgccgttggct
ccaacagctgtcgaggatgttgaggacaaggaggaacagagggtcatcattaaagaggcc
tttgcaggggatgatgtcatctccgacttcctgaaggacaaaaggaaacaggaggaagca
ggaaggccgaaggttattgacctgactttgcctggatggggagagtggggaggcctcggt
ctccaaccctctcgtagcaaacgcaagagattccgggtaaaagttgctcctcctccacca
aggcaagaccaaaagctccctaacatcatcatctcagagaagcgggattcctccattgct
gcacaccaggtgagtcagttaccattcccatttgagaaccccacacagtttgagcgcacc
atccgttctcctgttggccgcacctggaacacccaaaacacagtgcagaagatcacggcg
ccaaaggtcgtcacccagttaggtgccatcattgagccaattgctcgggaggacttaata
aaggacaacagacaggcagtcacagggaaagggcccaatataaacctggagtcagaccaa
ggcgctcagaagaaaagacgctcgcagcaaaagaagaaacacaaacacaaaaagaactga
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