Coregonus clupeaformis (lake whitefish): 121541949
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Entry
121541949 CDS
T08357
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121541949
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
Transposable elements
121541949
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GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
121541949
NCBI-ProteinID:
XP_041707290
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Position
27:38616549..38618793
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AA seq
350 aa
AA seq
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MACPFLRDPIDIGAQIVRKTIRTKRLFKDRQNPLSFSEEYINERYHFSSHCIVYLADLLT
PSLRNDTLRSYPLTVMQTLCIGLHFFACGEFMHAVGDAENLSKSTVCRAIRRVYLALARI
LPDFVKFPGHCSQQEVKDSFYRIAGLPNVIGVVDCTHIPIKVPSGPEASDYTNQRSFHSI
NVQMVCDSQCLITNIEAKWPGSVNDFHILQKSTLYHQFQQGIFDGWLVADNEYPCLPFMM
TPYLNPKPGAESCFNEALYETRACIKTTFTTLRARFGCLKGLWVSPQSACDIIVACMVLH
NVAIIRKEAPPCFSWMPRNKPEPVYCDHQDGTAIRDSIAAQLFASCSQVL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcccttttttacgagatccaatagacatcggggcacaaattgtgagaaaaaca
atacgaactaagcgtttgttcaaagacagacaaaatcctctaagtttttccgaagaatac
attaatgagaggtatcacttctcgtctcattgtatagtttacctggcggatctgttgaca
ccgtcattgagaaacgatacactccgcagctatccgcttacagtaatgcaaacactgtgc
attggtttacattttttcgcgtgtggagaatttatgcatgcagtcggtgacgctgaaaac
ttgagcaaatctacagtttgtcgagccatacggagagtatacctcgcactggcgagaatt
ctccctgatttcgtgaagttccctggtcattgctctcaacaagaagttaaagacagcttt
tatagaatagcaggactacctaatgtaattggtgtggtggactgcactcacatacccatc
aaagtgccttcaggaccagaggcatctgattatacaaatcagagatcatttcacagcata
aatgtgcagatggtttgtgattcgcaatgtctcatcacaaacattgaggcaaagtggcct
ggatctgtgaatgacttccacatactccaaaagagtacgctgtaccatcagtttcagcaa
ggtatttttgatgggtggcttgtggctgacaatgagtatccctgtcttccattcatgatg
acgccatacctgaatcctaaaccaggcgcagagagctgcttcaacgaggcactgtacgag
acaagagcatgcattaagacaacgttcaccacgttaagggcccgatttggttgtttgaag
ggtctctgggtgtcgccacagagcgcgtgtgacataatagtggcatgcatggtccttcat
aacgttgccatcattcgtaaggaggccccaccctgttttagttggatgccccggaataag
ccagagcctgtttactgtgatcaccaagatggtacagcaatcagggatagcatcgctgct
cagctctttgcgtcatgcagccaagtgttatga
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