Coregonus clupeaformis (lake whitefish): 121541958
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Entry
121541958 CDS
T08357
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121541958
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121541958
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121541958
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cclu04090
]
121541958
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121541958
Protein kinases [BR:
cclu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121541958
CD molecules [BR:
cclu04090
]
Proteins
121541958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
VEGFR1-3_N_Ig-like
I-set
ig
Ig_2
Ig_VEGFR-1-like_5th
Ig_PDGFR_d4
C2-set_2
SpaA_4
Motif
Other DBs
NCBI-GeneID:
121541958
NCBI-ProteinID:
XP_041707304
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MLFLALFLGIMLCTAQERSPPVIKLNSVVLREAERILPVGTSFTLTCEGDSTVTWSTTAF
KRRNTRLGSVITTGTIPLTADYTGTYKCAFDNQPDLFSEVHIYVKDPNNVLVTPRVLRDV
KEGRDLLLCQLTDPSATDLSLRMANGDPTPPDINYTVNPRRGILIRHLLTSHSANYVCSA
KINGVTRSSKDIPIIVIKSLSWPPSVFIEVDGYVSIVGEQLLIPCITSNPNHFFNVTWKH
SSLKALKVSQDVDQDKQVHITSTVTIPAVTMSDTGNFTCTAINEAGANSSTTYLQVVDEP
YIRLIPRLSPNLYQNGSLVEVKEGENLEISILIEAYPQIKKQWWDVPMSHSHNISTHDVT
WAVRGNNRYESSLLLQRVRSEERGQYTLHTRSTRLDSSITFNIQVYQKPSAMLRLKNSTT
LICTSSGYPAPTILWYQCPGIQNTCDGDNDTVEVQRLFTSTMEVQSELNLSLSTEDVTVE
CVTFNLVGEERDVFVSHVPASIPPVISELFTLTLIGATSTAAFLFLLLVIVLYKYKQKPK
YEVRWKIIEDNDGNNYTFIDPTQLPYNKKWEFPRDKLRLGQILGAGAFGKVVEATAYGLG
TDDNMTTRVAVKMLKPSAHSEEREALMSELKILSHLGCHDNIVNLLGACTQGGPMLMITE
YCSHGDLLNFLRGKAKLFLDSILSVQGVPEVPGDSYQYKNTCTQESRVRSDSGISCSSSD
NYQDMRPAQRPKHCPLGSLCEDPETGTWSLDIEDLLRFSYQVAQGMDFLASKNCIHRDVA
ARNVLLTDGCVAKICDFGLARDIENDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDIWS
YGILLWEVFSLGKSPYPNVVVDTRFYKMIKDGCHMSQPDFAPPEIYTIMKMCWNMEPTAR
PNFSTIGQLIQRLLPDLPDQTYMNVQDETPQQEAGEQYDQAKISEDCDQTLNQEEEEQPL
VMKNNNYQFC
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcctggcccttttcctgggcattatgctctgcacagcccaagagcgaagtcct
ccagtgatcaagctgaactctgtggtgctgagggaggctgagaggattttgcctgttgga
acgtcgttcaccttgacctgtgagggggacagcacagtcacctggtctaccacagcgttc
aaaaggaggaacactagactggggagtgtgattaccaccggcaccataccccttacagcg
gactacactggcacatacaagtgtgcgtttgacaaccaaccagacctgttctcagaggtc
cacatctatgtgaaagatccaaataacgtcctggtaaccccccgcgtcctgagagatgtg
aaggaaggcagggaccttctcctctgtcagctgacagaccccagtgccacagacctgtcc
ctccgtatggctaacggagacccaacaccccccgacatcaactacactgtcaatcccagg
agaggtatcctgataagacaccttctgaccagccacagtgcaaactacgtctgcagcgca
aagatcaatggggtcacaagatcctccaaagatatccccatcattgtcattaaaagtttg
agttggccaccgtctgtgttcattgaggtagatgggtatgttagtattgttggagagcag
ctcctcataccctgcatcaccagtaaccctaaccacttcttcaacgtcacctggaaacat
tcctctctcaaagcattgaaagtctcacaagatgtggaccaggacaagcaggtccacatc
accagtacagtgactatcccggctgtgaccatgtctgacacaggaaacttcacctgtaca
gccataaatgaggctggggccaacagctccaccacctacctgcaggtcgtagatgagcct
tacattaggctcataccccgcctgtcaccaaatctctaccaaaatggctccttagttgaa
gtgaaagaaggggagaaccttgagataagcattctgatcgaggcctatccccaaatcaag
aagcagtggtgggacgtgcccatgtctcacagtcacaacatctccactcatgatgtcaca
tgggccgtccgaggcaataacaggtacgaaagcagcctgctgctacagagagtgaggtct
gaggagagaggccagtacaccctccacaccaggagcacacgcctcgacagctccatcacc
ttcaatatccaagtctaccagaaacccagtgccatgctcagactgaagaattccaccacc
ctgatctgcacctcctctggatacccagctcccacaatcctctggtaccagtgcccagga
atacaaaacacgtgtgatggggacaatgacaccgtggaggtgcagcgtctcttcaccagc
accatggaggtgcagagtgaactgaacctcagtctctcaactgaggacgtcacagtggag
tgtgtgacctttaacttggttggtgaagagcgggacgtcttcgtatcgcatgttcctgct
tcaatcccacctgtaatatccgagctgttcaccctcactctcattggagccaccagcaca
gcagcttttctgttccttctgcttgtcatcgttctgtacaaatacaagcagaaacccaaa
tatgaagtccggtggaagatcattgaggacaatgatgggaataactacacctttattgat
cctactcaacttccctataacaagaagtgggagttccctcgtgataagctgaggcttggc
cagattctgggagcaggggcttttgggaaagtggtggaggccactgcctatggtctgggg
accgatgacaacatgaccacccgtgtggcagtaaagatgctcaagccaagcgcccactca
gaggagagagaggctctgatgtcagaactgaagatcctcagtcacctgggatgtcatgac
aacattgttaacctgttgggggcatgtactcaaggaggcccaatgctgatgatcacagag
tactgtagccatggcgacctgctgaacttcctgcgtggcaaggccaagctgttcctggac
tccatcctgagcgtacaaggggttccagaggttccaggggatagttatcagtacaagaac
acatgtacccaggagtctcgtgtcaggagtgacagtgggatctcctgctccagctcagac
aactaccaggacatgcgtccagcgcagaggcccaaacactgccctcttggttctttatgt
gaggatccagagacaggcacctggtcgctggacatagaagacttgttaaggttctcctat
caggtggctcagggaatggacttccttgcatccaaaaactgcattcacagggacgtggcc
gctaggaacgtcctattgaccgatggctgcgtggctaagatctgcgactttgggctcgct
cgagacatcgagaatgactccaactatgtggtgaaaggaaatgcccgtctgccagtgaag
tggatggcccctgagagcatatttgactgtgtgtacacggtgcagagtgacatctggtcc
tatgggatactgctgtgggaggtcttctctctgggtaagagcccataccctaatgttgtg
gtggacacccggttttacaagatgatcaaagatggatgccacatgtcacagccggacttt
gcccctccagagatatacaccatcatgaagatgtgctggaacatggaaccaacagcgcgt
ccaaacttcagtaccattggccagcttatccagaggctactgcctgacctgccagaccag
acctacatgaatgtgcaggatgagacgccacagcaggaggcgggagagcagtatgatcaa
gctaagattagtgaggattgtgatcagacactgaaccaggaagaagaggagcagcccctg
gtgatgaagaataacaactaccagttctgctga
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