Coregonus clupeaformis (lake whitefish): 121542000
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Entry
121542000 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: protein phosphatase Slingshot homolog 1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121542000
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121542000
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
121542000
3.1.3.48 protein-tyrosine-phosphatase
121542000
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
121542000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Motif
Other DBs
NCBI-GeneID:
121542000
NCBI-ProteinID:
XP_041707354
LinkDB
All DBs
Position
27:37032545..37076994
Genome browser
AA seq
1388 aa
AA seq
DB search
MALVTVQRSPTPSTSSSPCVSESGSGEEDRRSQPRSISESFLTVKGAALFLPRGNGSSPT
SASRFSQLRSKHAGDLQQHLQTMFTLLRPEDNIKLAVRLESTLYQGTRYMVVVSTNGRQD
TEESLVLGMDFSPADSSCSVGLVLPLWSDSLIHLDGDGGFSVSTDNRIHVFKPVSVQAMW
SALQSLHKACEVARCHNYYPGSLFLTWVSYYQSRVSSDQSRINEWNAMQDVQSHRADSPV
LFSGMPTERERTERLIKTRLREIMMQKDLENVTCKEIRTELEVHMVCNLCEFKEYIDNEM
ILILGQMDSPTEIFDHVYLGSEWNASNLEELQNSGVQYILNVTREIDNFFPGVFEYHNIR
VYDEEATDLLAYWNDTYKFISRAKKAGAKCLVHCKMGVSRSASTVIAYAMKEYGWDLERA
FNYVKERRAVTKPNPSFMRQLEEYQGILLASKQRHNKLWRSHSDSDLSEHHEPLCKTAQH
PHTLGRSDPRNQGNSPATPSLQELLQPLGTPSNTGQVVRSISECGTPSSAGKVVQSSSQP
NTTATQENNMDTNQKTRTEALLTSTTGDQSVGTGDQSSPTGDQSAPTGDQSAPTGDQSAP
TGDQSAPTGDQSAPTGDQSAPTGDQSAPTGDQSAPTGDQSAPTGDQSSPTGDQKPSPATV
TTASTGSQAQGESVCSPSPPLQGLCDSEEDPSTPPLPQPRAATVVPDISTVTVAETVPVG
RPHPPPSLHHLPLSLPTPSDADKTPKAKEPSTTLPKEKYSQPQVTPSVLESSSMTPETST
QTAGPQEPSTPVPDKKLDCDQRLPGACLDSSASQQPSSIEVLIISQPSAPPQDPAAGAGG
SSALSTDHINFFSAREKFQGLTQDGRTRFLSDQALQQTPQPIPRDPGQEQQEDPSAVATE
EGEEEEVEERKRNNIVSVHLIVTELESLMHTVIPPPGPPSQHEPTASQDQEVGQSNQEVE
GKDAESQQEVEDIKEEVKDKAEEMEAVSNSPPAPHSGDWALGSVRRVTQQLEQRMRHDSP
SPPPPSLHPTHPHRRSPLFPHSREHSPPASHPLPETNSNPQNAPLCLQGSEVSTMQEKEE
DGGCSPMEDGGQEAWREGLHEDSGQTHKHNITDGSLVSTFHLPPITPLHPTPITPHHPTL
RSALAPLSSMDILCLEGVTEFESGTDWDSPPGRGPPGDIIMRETWETLRELGAFLRQVSG
GGAKVWGEGVEARQKRVRGGDRQRAREVEARIRQAGLTPPSLMKRSASLAKLGCLELSAN
DLSDWEISPTSPVTPTLEALPPSAAADESSKKLRVLFHNALCPSVSTSRQESLRNRAEGP
CESGHTPSEHSRSPTSNQGWQKGKRPDSGHAPLLTPDLISVATRQQYGRTHPLRRLKKWT
VSTLYHTM
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggttaccgtgcagcgctcaccgacccccagcaccagctccagcccctgtgtt
tcggagtccggcagtggggaggaggaccggcgctctcagcctaggagtatcagtgagagc
ttcctgacagtgaaaggcgccgccctcttcctgccccggggaaatggctcctcccctacc
tccgcctcccggttctctcagctccgcagcaaacatgcaggtgacctccagcagcacctg
cagaccatgttcactctcctccgaccagaggacaacatcaaactggctgtacggttggag
agtaccttataccaggggactcgctacatggtggtggtctccactaacggccgccaggac
acagaggagagcctggtgctgggcatggacttcagccctgcagacagctcgtgctcggtg
gggctggttctccccctatggagcgactcactgatacacctggatggagacgggggtttc
agtgtgtccactgataacaggatccatgtattcaagcctgtgtcagtgcaggccatgtgg
tctgctctgcagtcgctccacaaggcgtgtgaggtggctcgttgccataactactacccc
ggcagcctgttcctgacctgggtcagctactaccagagccgggtctcctctgaccaatca
cgcatcaacgagtggaacgccatgcaggacgtccaatcacatcgtgctgactctcccgtg
ctgttctctggcatgccgacagagagagagaggacggagcggctgatcaagactcgtctg
agagagatcatgatgcagaaagacctggagaatgtcacctgcaaagagatccgcacagag
ctggaggtacacatggtgtgtaacctgtgtgagtttaaggagtacatagacaacgagatg
atcctgatcctgggccagatggacagtcccactgagatattcgaccatgtttacctgggc
tctgagtggaatgcatccaatctggaggagctgcagaacagtggtgtgcagtatattctg
aacgtgacaagggagattgacaacttcttcccaggtgtgtttgagtaccataacatccgt
gtgtatgatgaggaggctacagacctgctggcctactggaacgacacctacaagttcatc
tccagagccaagaaagcgggagctaagtgtctggtgcactgtaagatgggtgtgagtcgc
tctgcctccacggtgatagcctacgctatgaaggagtacggctgggacctggagagagca
ttcaactacgttaaggagcgacgtgctgtcaccaaacctaacccgtcatttatgagacag
ctagaggaataccagggcatactgctggccagtaagcagaggcacaacaagctgtggcgt
tcccactcagacagtgacctatcagagcaccacgagccgctgtgtaagaccgcccaacac
ccccacaccctgggccgctccgatccccgtaaccagggtaacagccccgccaccccctca
ctgcaggagctgctgcagccgctgggcaccccctccaacacggggcaggtggtgcggtcc
atctctgagtgtgggaccccctctagtgcagggaaggtggtacagtccagtagccagccc
aatactactgctacccaagagaataacatggacactaaccagaagactaggactgaagct
ctgttgacctccacaactggagaccagtcagtaggcactggggaccagtcttctcctact
ggcgaccagtctgctcctactggcgaccagtctgctcctactggcgaccagtctgctcct
actggcgaccagtctgctcctactggcgaccagtctgctcctactggcgaccagtctgct
cctactggcgaccagtctgctcctactggcgaccagtctgctcctactggcgaccagtct
gctcctactggcgaccagtcttctcctactggcgaccagaagccttcaccagcaacagtt
actactgcctccactggttcccaggcccagggggagtctgtatgttccccgtcaccccct
ctccaaggcctgtgtgattccgaggaggacccctcgaccccgcctctcccccagccgcgg
gcggccaccgtggtgcctgacatttctacggtaactgtggcggagacagtgcctgtcggg
cgccctcacccacccccctcccttcaccacctccccctctcccttccaaccccctccgat
gcagacaagactccgaaagccaaggagccgtccaccaccttgcctaaggaaaaatactct
cagccacaggtgaccccatcagtgctggagtcatcgtcgatgaccccggaaacaagcaca
caaacagcaggaccacaagagccgtccacaccagtgcctgacaagaaactagactgtgac
cagcggttacctggggcatgtttggacagttcagcatcccaacaaccctccagtattgag
gtactcatcattagccagcccagtgcccccccccaggaccctgctgccggggcggggggg
tcctcggctctcagcacagaccacatcaacttcttcagcgccagagagaagttccagggt
ctgactcaggacgggaggacccgtttcctttctgatcaggcactgcaacagacacctcag
cccatacccagggatccaggacaggagcagcaggaggacccctctgctgtggcgactgag
gagggagaggaggaggaggtcgaggagaggaagaggaacaacatcgtctctgttcacctc
atagtcacagaactggagtccttgatgcacactgtgatccctccccctggccctcccagc
caacatgagcctactgcttcccaggaccaggaagtgggtcagtcaaaccaggaagtagag
ggcaaagatgcagagtcacagcaggaagtggaggatatcaaagaggaagtgaaggacaaa
gcagaagagatggaagcagtctccaactctcctcccgcccctcactctggtgattgggcg
ttgggctctgtgcgccgcgtcacccaacagctggagcagcgaatgaggcacgactcccct
tccccacctccaccttccctccacccgacccacccccatcgtcgctcccctctcttccct
cactcaagagaacactcccctcctgcctctcaccccctcccagagacaaactccaacccc
cagaatgcaccactctgcctgcaggggtcagaggtcagcactatgcaggaaaaggaggag
gatgggggctgtagtcctatggaagatggaggacaggaggcttggagagaaggtttacat
gaagacagtggccaaacgcacaaacacaacattactgatggcagccttgtatctaccttc
caccttccacccatcacccctctccaccctacccccatcacccctcaccaccctacccta
cgctccgccctcgcccccctctcatccatggatatcctgtgtctggagggggtgacagag
tttgagtcgggcacagactgggacagtcccccgggtcgaggaccccccggtgacatcatc
atgagggagacgtgggaaactctgcgggagctgggggcgttccttcgccaggtgagcggg
ggcggagccaaggtgtggggggaaggtgtggaggcgaggcagaagagggtcaggggtggc
gaccggcagagagccagggaggtggaggcacggattcgccaggctgggctgaccccgccc
tccctgatgaagcgctctgcctcattggctaaactgggctgcctagagctgtcggccaat
gacctgagtgactgggagattagccccacctctccggtgacacccactctggaagccctc
cctccttcggcagcagctgacgagtcctccaagaaactcagggtgctattccacaatgcc
ctgtgtccttctgtctccaccagcaggcaggagtccctcaggaacagagcggaggggcct
tgtgagagtggacacaccccatcagaacactcgcgttctcctacgtccaatcagggctgg
cagaaggggaaacgtcctgactctggccacgcccccttgctgacgcccgacctgatctcc
gtggcaacacgacagcagtatggaaggacacacccgctacgcaggctgaagaaatggact
gtcagcaccctctaccacactatgtga
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