Coregonus clupeaformis (lake whitefish): 121542007
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Entry
121542007 CDS
T08357
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121542007
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121542007
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
121542007
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
FORS blood group (Forssman antigen)
121542007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
121542007
NCBI-ProteinID:
XP_045063925
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Position
27:45342329..45370059
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AA seq
362 aa
AA seq
DB search
MLQKREHCLLALIMAGGTVLCWLVFLCCPSVHPSVSVKLQSKQAKLMEPVEGPSEYDEGL
TWRQVHHQVVVNHRLQSKQAKLMEPVRNDVLTITPWLAPIVWEGTFDPQVIDEAFRSLNL
TIATTVFAVGKYTRFLRDFLESAEKHFMVGLEVHYYVFTDLPGDVPGNVTLGVGRLLSIV
SVPKFDRWQEISLRRMEIIQTAIEVHIHREAHYIFCLDVDMRFHGRVGPEALGRLVAAIH
PWFYWYPRNQYPYERRTVSTAYVPLDQGDFYYQANIFGGALEDVHRLTKTCREHLEVDKS
VGVEAVWQEESHLNWYLVKNKPTKLLSPEYVWDDARGREAKEIKLVRFSSVIKNKAEVRE
NP
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaaaacgtgaacactgcctacttgctttaataatggctggggggacggttctc
tgctggcttgtcttcttatgctgtccatctgtccatccatctgtctctgtcaaattacag
agcaagcaagccaagcttatggaaccagttgagggtcccagtgagtatgacgaggggtta
acatggcgccaggtgcatcaccaggttgtggtgaatcacagattacagagcaagcaagcc
aagcttatggaaccagtgaggaatgacgttctgactataaccccatggctggctcctata
gtctgggagggaaccttcgacccccaggtcatagatgaggccttcaggtccctcaacctc
accatcgctacaactgtatttgctgtagggaaatacactcgttttctccgtgacttctta
gagtcagctgagaagcacttcatggtggggctggaggtacactattacgtgttcaccgac
ctgcccggtgatgtgcctggcaacgtgactcttggtgtcgggagactgctcagcatcgtg
agcgtgccgaagttcgaccgctggcaggagatatccctccgccgcatggagatcatccag
actgccattgaggttcacatccaccgggaggcgcactacatcttctgccttgatgtagac
atgaggttccatggccgtgtggggccagaggctctggggagactggtggccgccatccac
ccctggttctactggtacccccggaaccagtacccctacgagcggcgaaccgtctccaca
gcctatgtacccctggaccagggagacttctactaccaggccaacatattcggaggagcg
ctggaggatgttcacaggctgaccaagacgtgcagggagcacctggaggtggataagtca
gtgggtgtggaggctgtgtggcaggaggagagtcatctgaactggtacctggtgaagaat
aagcccaccaagctgctgtcacctgaatatgtgtgggacgacgctagaggacgggaagcc
aaggagataaaactggtccgcttctcctctgtcatcaagaacaaggcagaggtcagggag
aacccatga
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