Coregonus clupeaformis (lake whitefish): 121542053
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Entry
121542053 CDS
T08357
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121542053 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121542053 (supt20)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
121542053 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
121542053
NCBI-ProteinID:
XP_045064173
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All DBs
Position
27:complement(44632695..44671275)
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AA seq
829 aa
AA seq
DB search
MQQVLEYALDRAEYIVESARQRPAKRRASSGGRKSLYQKLYELYIEECEKEPELKKLRRN
VNLLEKLMCQESVSCLVVNLYPGNQGYSLMLRGKNGSDSETIRLPYEEGQLLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVVAEVRDYRQSGNTKMPSFQSRHVLLRPTMQTLICDVHAM
TSDHHKWTQDDKFQLESQLLLATADPLCLDPSVSVTCTANRLLYNKQKMNTHSMKRCFKR
HSRAALNRQQELSYLPVPPQLRLYDYLQRRKERKPAPSIDLKISKAGNCVDMWKQSICQL
TVPKEIDVDKYAVVERSVKLEESQPTVWPAEEVIDDYTFECEVGGKAQRTKVSIFQSVGD
PLVYGKIYCAKEPKTEEDSSDLHLIHPSFLIGSKIDADRFLSQYKGVYESDVKCQVKMSH
NSGFVGQNQLSPNRQTEADGLSALVQSSGVLGKGVKHRPPPIKLPSGSGSSSSGNLYSSA
QATSGLLTCPTPPPGTGPGSVKPQCLSRKHSLELGQGLQLGGQLGQVGLLSPAALSPMGS
TQRSGTPKPSTPTPTSTPCSTPHPPDSLLSLCSLPSSVTPAPPEPQALQAPYPQQQLPLS
QALPVITIPLPTMGTGTTSSQVMANPAGLNFINVVGSVCSPQTLMNSSQMLGPGLNLSGL
GGLMPTMQPTTQTGSPFGLSSSPDLRPLNLLQIPTGPLIFNSLQQQQLSQFSPQQSQSAT
SSPQQQGDTGDQGSDQGVGAQQTAVINLTGVGGFMSPQTAVLSQLSCVLEGSGPLLPSPR
LQQPQIQLQFLHQMQQQQMAMGGAGPQLHTASQPRSKRKRSTPQPLPKS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttttggaatatgcattggatagggctgagtacattgttgaaagtgctcgt
caacggccagccaagaggagagcctcatccggagggaggaagagtttataccagaaacta
tacgagctctacatcgaagagtgtgagaaggaaccagagctcaagaagctgcgtaggaat
gtgaacctgctggagaagctgatgtgtcaggagtcagtgtcgtgtctggttgtcaacctc
taccccggcaaccagggatactccctcatgctccgcggcaagaatggatctgactctgag
acgatccgtctgccgtatgaggaaggacagctgttggagtacctggatgctgaggagctt
cctcctatcctggtggatctcttggagaagtcccaggtgaacatcttccactgtggctgt
gtggtagcagaggtcagagactacagacagtctggcaacactaagatgccctccttccag
agcagacacgtcctgctacggcccaccatgcagacactgatctgtgacgtccatgccatg
accagtgaccaccacaaatggactcaggatgacaagttccagttggagagccagttactg
ctggccacagctgatcctctgtgtctggatccatctgtctctgtcacctgtacagccaac
cgcctgctctacaacaagcagaagatgaacactcactctatgaaacgttgttttaaacgt
cactctcgggcggcgttgaaccgtcagcaggagctgtcttacctgcccgtgcccccccag
ctgcgtctctatgactacctgcagaggaggaaggagaggaagcctgccccctcgatagat
cttaagatctccaaggccggaaactgtgtggacatgtggaagcagagcatctgccagctc
actgtccccaaggagattgatgtggataaatatgctgtggtggagaggtcagtgaagctg
gaggaatctcagcccactgtctggcctgcagaggaagtgatagatgactatacgtttgag
tgtgaggttgggggcaaagcccagaggaccaaagtgtccatcttccagtcggtgggagac
cctctggtctacggaaagatctactgcgccaaagaacccaaaactgaggaggacagcagc
gatctacacctcatacacccatctttcctaataggatcgaagatagatgctgatcggttc
ctgtctcagtataaaggtgtgtatgagtcggacgtgaagtgccaggtgaagatgtctcat
aactcgggattcgtgggacagaaccagctctcacccaacagacagacagaggcggatggt
ctatcagccctggttcagtcgtcaggcgtgttggggaagggggtgaagcaccggcctccc
cccatcaaactaccctccgggtcgggcagcagctcctcaggtaacctgtatagttcagcc
caggctaccagtggtctcctcacgtgtcctacgccccccccaggaacaggccccggctca
gtcaagccccagtgtctgagtaggaagcactctctggagctggggcaggggttacagctg
ggggggcagttaggacaggtggggttgttgtccccggcagccctgtctcccatggggtca
acacagagatcggggacccccaaaccatccacgcccacccccaccagcaccccctgttcc
acccctcacccccccgactccctcctctccctctgttccctcccgtcctctgtcaccccc
gcccctccggagccccaggccctccaggccccgtacccccagcagcagcttcccctgtcc
caggctctgcctgtaataaccatccctctccccaccatgggaacaggaaccacctcctct
caggtcatggctaaccctgctggactcaacttcatcaacgtggtgggatctgtctgcagt
ccccagactctgatgaattctagtcagatgttgggtcctggtctcaacctaagtggtcta
ggaggactgatgcctaccatgcagcctaccacacagacagggagtccgtttggtttgagc
agcagtccagaccttagacccctcaacctgctccagatccctacaggtcctctgatcttt
aactctctgcagcagcagcagctctcccagttctctcctcaacagagtcagtctgctacg
tctagcccacagcagcaaggagacacgggtgatcaggggtcagaccagggtgtgggtgct
caacagactgctgtcatcaacctgactggagtaggaggcttcatgtccccacagacagca
gttctgtcccagttaagctgtgttctggaaggttctggtcccctcctgccctctccaagg
cttcagcagccacagatacaattgcaattcttgcaccaaatgcagcagcagcaaatggct
atggggggggcggggccacagctacataccgccagccaaccaagaagtaagaggaagagg
agcacgccgcagcccctccccaaatcatga
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