Coregonus clupeaformis (lake whitefish): 121542060
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Entry
121542060 CDS
T08357
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121542060 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121542060 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121542060 (vps36)
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
121542060 (vps36)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121542060 (vps36)
Exosomal proteins of colorectal cancer cells
121542060 (vps36)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
TssO
NAI2_C
Motif
Other DBs
NCBI-GeneID:
121542060
NCBI-ProteinID:
XP_041707435
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Position
27:43136336..43197927
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AA seq
386 aa
AA seq
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MDRFTWSNGLLEMNETLVIQQRGVKLYDGEDKAKLDVGIALLSTHQLIWRDLKNNECCIA
IPLSQIIYFEEQAAGIGKSAKIVIHLHSAPANKEPGPYQQSKFSYIKLSFKEHGQIEFYR
RLTEELSQKRWESTPMSQPIPTATDSQTGRTRAVGIVGIERKIEERRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHLQLAKQLGDMLLAPLEERGGMMVLTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRIFDSGVMVVQLQSHSEEEMISSALDNVTDKGSLTAEEFAKMLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLFNSQA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacagattcacatggtcaaatggtcttctggaaatgaatgaaacgttggtgattcaa
caacgaggtgtcaaactttatgacggagaagacaaggccaagttggatgttggaattgct
ctgctgagtactcaccagttaatatggagggacctgaagaataatgaatgctgcatagcc
atacccctttctcagatcatctactttgaggaacaagctgcgggtatcggaaagagtgcc
aagattgtgatccacctgcactctgccccggccaataaggagccaggaccctaccagcag
agcaagttctcctacatcaaattgtccttcaaagagcatggacagatagagttctacagg
aggctgacagaggagttgagtcagaagagatgggagagtacgcccatgtcacagcccatc
cccacggcaacggactcacagacaggaaggacgcgggcggtggggatcgtcggcattgag
aggaagatagaggagaggaggaaagagacagacaaaaacatctcagaggcctttgaggac
ctcagtaagctgatggtgaaggctaaggagatggtggagctgtccaggtccatcgccaac
aaaatcaaagacaagcagggagacatcacagaggatgagacgatccggttcaaatcctac
ctgctcagtatgggtatagccaaccctgttaccagggagacgcacggttctggaacccac
tatcacctacagctggccaagcagctgggagacatgctgctggcaccactggaggagcgt
ggtgggatgatggtcctgactgaagtctactgtctggtcaacagagctaggggaatggag
ttgctatctccagaggatttggtgaatgcctgtaagatgtttgagtcgctgaagctacca
ctgaggttgcgtatctttgacagtggtgtgatggtggttcagttgcagtcccacagtgag
gaggagatgatctcctcggccctggacaacgtaactgataaaggttctctgacagccgag
gagtttgccaagatgctgggtctctctgttcttctgtctaaagaaaggttgttactagca
gagaagatgggtcacctgtgtagagacgactctgtggaaggactacggttttaccccaac
ctcttcaacagtcaggcttga
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