Coregonus clupeaformis (lake whitefish): 121542097 Help Entry 121542097         CDS       T08357                                  Symbol si:dkeyp-50d11.2 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04141   Protein processing in endoplasmic reticulum cclu04210   Apoptosis cclu04217   Necroptosis cclu04218   Cellular senescence cclu04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     121542097 (si:dkeyp-50d11.2)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     121542097 (si:dkeyp-50d11.2)    04217 Necroptosis     121542097 (si:dkeyp-50d11.2)    04218 Cellular senescence     121542097 (si:dkeyp-50d11.2)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     121542097 (si:dkeyp-50d11.2)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:cclu01002]     121542097 (si:dkeyp-50d11.2) Enzymes [BR:cclu01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      121542097 (si:dkeyp-50d11.2) Peptidases and inhibitors [BR:cclu01002]  Cysteine peptidases   Family C2: calpain family    121542097 (si:dkeyp-50d11.2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh EF-hand_5 Ndufs5 Motif Other DBs NCBI-GeneID:  121542097 NCBI-ProteinID:  XP_041707488 LinkDB All DBs Position 27:complement(39843721..39854043) Genome browser AA seq 710 aa AA seqDB search MAMEQVIEPVFASGVAARLRSQWDRNEGIGQNDKALKFFGQDFECLRAHSLQSRRLFEDD AFPAQTSSLGFKELGSHSAKTQGVRWMRPTEFCSDPHFIVDGATRTDVCQGALGDCWLLA AIASLTLNETLLHRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFLH SAEGAEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELKKAHPELFSIIS RAVERGSLLGCSIDISGVFEMEAMTFKKLVKGHAYSVTGVEEVEFKGSPTKLLRIRNPWG EMEWTGAWSDNSREWAGVEPSVRARLYNRSEDGEFWMSFRDFLREFSRLEICNLTADALQ ASQVKKWSSALYPGEWRRGSTAGGCRNYPATFWLNPQFKVALQHPDADGQSGCSFLVALM QKDRRRQRREGKDMETIGFAIYEVPEEFTGRPGVHLKRDFFLTHSSSARSELFINLREVS TRFCLPKGEYIIVPSTFEPQKNGDFVLRVFSEKPADSQELDDDITADLPEVIVLDESQID AGFKGLFRQLAGTETEISASKLQTILNRIVSKHKDLKTDGFGKEACRCMITLMDTTGTGK LGLTEFHVLWEKIKRYLTVFRKFDLDKSGTMSSYEMRMALESAGFKLTNHLFQLIILRYA KEDLNVDFDNFVNCLIRLETMFKTFKEMDTDVDGVVSFSFFQWISLTMFA NT seq 2133 nt NT seq  +upstreamnt  +downstreamnt atggctatggagcaggtgattgagcctgtgtttgcctctggagtggctgctcgtttgagg agccagtgggaccgcaatgagggcatcggtcagaatgacaaggccctgaagttcttcggc caggactttgagtgtctccgggcccacagtctgcagagcagacgcctgtttgaggatgat gcattccctgctcagacctcatcgctgggcttcaaggagctggggtcacactctgcaaag acacagggggtccgatggatgcgccccacggagttctgttctgaccctcacttcatcgta gacggagccacgcgtacagacgtctgccagggagctctgggtgactgttggctgctggca gcgatcgcttcactcacactgaatgagactctactgcatcgggtggtgccccatgggcag agcttccatcaacagtatgctgggatctttcacttccagttctggcagtttggggagtgg gtggacgtggtgattgatgacaggctgccagtgaaggatggaaagctgctgttcctccac tcagcagagggggcagagttctggagcgccctgctggagaaggcctacgcaaagctcaac ggctgttacgaggccctctcagggggcagtacatcggagggatttgaggacttcacaggg ggcgtgacagagatgtttgagctgaagaaggcccatccagaactgtttagcataatcagt agagcagtggagagaggatccctgctgggatgctccatagatatctctggtgttttcgag atggaggcgatgacattcaagaagctggtgaaaggccatgcctactctgtgacaggtgtg gaggaggtggagtttaaaggaagtcccaccaagcttctgcggatcaggaacccctgggga gagatggagtggaccggagcctggagtgacaattcaagagagtgggctggagttgaacca tcggtcagagctagattgtacaaccgtagcgaagatggagagttctggatgtcattccgt gacttcctgcgtgagttcagccgtttggagatctgtaatctgacagcagacgccctgcag gccagccaggtgaagaagtggagctcagcgctctaccctggagagtggaggagaggcagc actgcagggggctgcaggaactacccagcaacgttctggctcaaccctcagttcaaagtg gcccttcagcacccagacgcagatggccaatcaggttgcagcttcctggtggcgctgatg cagaaggatcgtcgtcggcaacggcgtgaggggaaagacatggagaccattggattcgcc atctatgaggttccagaagagtttacaggtcggcccggggtgcatctgaagagggacttc ttcctgacccacagctccagtgcccggtcagagctcttcatcaacctgagagaggtcagc acccgcttctgcctgcccaagggagagtacatcatcgtcccctccaccttcgagccccag aagaacggagactttgtgctcagggtgttctctgaaaagccagccgactcccaggaattg gatgatgacatcacagctgatctgcctgaggtgatagtgctggatgagagccagattgat gcaggcttcaagggtctcttcagacagctggctggaacggaaacggagatcagtgcctcc aagcttcagaccatcctaaacagaatcgtcagcaagcataaggacctgaagacagacggc tttgggaaggaggcttgtcgttgcatgataactctcatggataccaccggcaccgggaag ctgggcttgacagagttccatgtgctgtgggagaagatcaaacggtacctgactgtgttt aggaagtttgacctggataaatctggcaccatgagctcctatgaaatgcggatggcactg gaatcagcaggcttcaagttgaccaaccacttgttccaactcatcatcctgcgctatgca aaggaagacctgaacgtggactttgataactttgtaaactgtctcatccgcctggagacc atgttcaagacctttaaagaaatggacactgatgtagatggggtggtatccttcagcttc ttccagtggatctccctcaccatgtttgcctag

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